Escherichia coli O150 H5 SE15 (commensal): ECSF_4130
Help
Entry
ECSF_4130 CDS
T02077
Name
(GenBank) trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
ese
Escherichia coli O150:H5 SE15 (commensal)
Brite
KEGG Orthology (KO) [BR:
ese00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ese03000
]
ECSF_4130
Transcription factors [BR:
ese03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ECSF_4130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_3
HTH_31
HTH_IclR
HTH_7
MarR_2
HTH_Tnp_ISL3
AAA_18
HTH_28
HTH_Crp_2
HTH_26
CENP-B_N
MarR
TrmB
HHH
Peripla_BP_4
HTH_AraC
HTH_38
HTH_17
Motif
Other DBs
NCBI-ProteinID:
BAI57670
LinkDB
All DBs
Position
complement(4504701..4505648)
Genome browser
AA seq
315 aa
AA seq
DB search
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNID
GVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISY
LGVPHSDVTTGKRRHEAYLAFCKTHKLHPVAALPGLAMKQGYENVAKVITPETTALLCAT
DTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVT
GRSEPQQIIIPATLS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcggctgaccatcaaagacatcgcgcgcttaagcggcgtggggaaatctacg
gtttcccgggtgctgaataacgaaagcggcgtgagccagcgcacgcgcgagcgtgttgaa
gcagtgatgaatcagcatggattttccccttcccgctctgcgcgcgctatgcgtgggcaa
agcgataaagtggtcgccatcattgttacccgtctggattcgttgtcagaaaatctcgcc
gttcaaaccatgctgccagcgttctatgaacaaggttacgatccaatcatgatggaaagt
cagttttccccacaattagttgccgaacatttgggggtgctgaaacggcgtaatatcgac
ggcgtagtgctgttcggttttaccggcataacagaagaaatgttagcccactggcagtca
tcgctggttctgctggcgcgtgacgcaaaaggctttgcttcggtctgttatgacgacgaa
ggggcaatcaagatcctgatgcaacggctgtatgaccagggacatcgtaatatcagctat
ctcggcgtgccgcacagtgacgtgacaaccggtaagcgacgtcacgaagcctacctggcg
ttctgcaaaacgcataaattgcatcccgttgccgctctgccagggcttgctatgaagcaa
ggctatgagaacgtagcaaaagtgattacgcctgaaactaccgcgttactgtgcgcaacc
gacacgctggcacttggcgcaagtaaatacctgcaagagcaacgcatcgacaccttgcaa
ctggcgagcgtcggtaatacaccgttaatgaaattcctccatccggagatcgtcaccgta
gatcccggttatgccgaagctggacgccaggcggcctgccagttgatcgcgcaggtaacc
gggcgcagcgaaccgcaacaaatcatcatccccgccaccctgtcctga
DBGET
integrated database retrieval system
