Escherichia sp. F1: ACK8NJ_02785
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Entry
ACK8NJ_02785 CDS
T11101
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
esf Escherichia sp. F1
Pathway
esf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACK8NJ_02785 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esf03019
]
ACK8NJ_02785 (deaD)
03009 Ribosome biogenesis [BR:
esf03009
]
ACK8NJ_02785 (deaD)
Enzymes [BR:
esf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACK8NJ_02785 (deaD)
Messenger RNA biogenesis [BR:
esf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACK8NJ_02785 (deaD)
Ribosome biogenesis [BR:
esf03009
]
Prokaryotic type
rRNA helicases
ACK8NJ_02785 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
AAA_22
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
XMR21628
LinkDB
All DBs
Position
592901..594790
Genome browser
AA seq
629 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF
SLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEELD
LETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREDRPRRER
RDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGE
VLQHFTRTRILNKPMNMQLLGDAQPHTGGERRGGGRGFGGERREGGRNFSGERREGGRGD
GRRFSGERREGRAPRRDDSTGRRRFGGDA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccaattcaggcagagtgtattccacatctg
ctgaatggccgcgacgtcctgggtatggcccagacggggagcggaaaaactgcagcattc
tctttacctctgctgcagaatcttgatcctgagctgaaagcaccacagattctggtgttg
gcaccgacccgcgaactggcggtacaggttgctgaggcaatgacggatttctctaaacac
atgcgcggcgtaaacgtggttgccctgtacggcggccagcgttatgacgtgcaattacgc
gccctgcgtcaggggccgcagatcgttgtcggtactccgggccgtctgctggatcacctg
aaacgtggcactctggacctttctaaactgagcggtctggttctggatgaagctgacgaa
atgctgcgcatgggcttcatcgaagacgttgaaactattatggcgcagatcccggaaggt
catcagaccgctctgttctctgcaaccatgccggaagcgattcgtcgcattacccgccgc
tttatgaaagagccgcaggaagtgcgcattcagtccagcgtgactacccgtcctgacatc
agccagagctactggactgtctggggtatgcgtaaaaacgaagcactggtacgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgactctggaa
gtggcagaagctcttgagcgtaacggctacaatagcgccgcgctgaacggtgacatgaac
caggcgctgcgtgagcagacactggaacgactgaaagatggtcgtctggacatcctgatt
gcgaccgacgttgcggcccgtggcctggacgttgagcgtatcagcctggtagttaactac
gatatcccgatggattctgagtcttacgttcaccgtatcggtcgtactggtcgtgcgggc
cgtgctggccgtgcgctgctgttcgttgagaaccgtgagcgtcgtctgctgcgtaacatt
gaacgcaccatgaagctgaccattccggaagttgaactgccgaacgcagaactgctgggc
aaacgtcgtctggaaaaattcgccgctaaagtacagcagcagctggaaagcagcgatctg
gatcaataccgtgcactgctgagcaaaattcagccgacggcagaaggtgaagagctggat
ctcgaaactctggccgccgcactgctgaaaatggcacagggtgaacgtactctgattgtt
ccgccagatgcgccgatgcgtccgaaacgtgaattccgtgaccgtgatgaccgtggtccg
cgcgatcgtaacgaccgtggcccgcgtggtgaccgtgaagatcgtccgcgtcgtgaacgt
cgtgatgttggcgatatgcagctgtaccgcattgaagtgggccgcgatgatggtgttgaa
gttcgtcatatcgttggcgcgattgctaacgaaggtgacatcagcagccgttacattggt
aacatcaagctgtttgcttctcactccaccatcgaactgccgaaaggtatgccgggtgaa
gtgctgcaacactttacgcgtactcgcattctcaacaagccgatgaacatgcagttactg
ggcgatgcacagccgcatactggcggtgagcgtcgtggcggtggtcgtggtttcggtggc
gaacgtcgtgaaggcggtcgtaacttcagcggtgaacgccgtgaaggtggtcgtggtgat
ggtcgtcgttttagcggcgaacgtcgtgaaggccgcgctccgcgtcgtgatgactctacc
ggtcgtcgtcgtttcggtggtgatgcgtaa
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