Escherichia sp. F1: ACK8NJ_05645
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Entry
ACK8NJ_05645 CDS
T11101
Symbol
csiR
Name
(GenBank) DNA-binding transcriptional regulator CsiR
KO
K15735
GntR family transcriptional regulator, carbon starvation induced regulator
Organism
esf Escherichia sp. F1
Brite
KEGG Orthology (KO) [BR:
esf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esf03000
]
ACK8NJ_05645 (csiR)
Transcription factors [BR:
esf03000
]
Prokaryotic type
Helix-turn-helix
GntR family
ACK8NJ_05645 (csiR)
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GFIT
Motif
Pfam:
FCD
GntR
HTH_41
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
XMR22142
LinkDB
All DBs
Position
complement(1171992..1172654)
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AA seq
220 aa
AA seq
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MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVN
QKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKLEACDAS
EKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAARYRFIWLRRTVLSVEMLEDKR
DQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMAGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaccattacgtctctggatggctatcgctggctgaagaacgatattattcgcggtaat
tttcaaccggatgaaaaattacggatgagtttgctgacatcgcgttacgcacttggcgtt
gggccgttgcgggaagcgctttcgcaactggtagcagaacgactggtcacggtggtgaat
caaaaagggtatcgggtggcgtctatgtcagagcaggagctgctcgatattttcgacgcc
cgcgccaatatggaagcgatgctggtcagtctggcgattgcccgcggtggcgatgaatgg
gaggcagacgttctcgcaaaagcgcatctgctgagtaagctggaggcctgtgacgccagt
gagaaaatgcttgatgagtgggatctgcgtcatcaggcgtttcatactgcaattgtggcg
ggctgtggttctcactatttgctgcaaatgcgtgaacggttgtttgatctggcggcgcgc
tatcgatttatctggctgcggcgaacagtgctttcggtggaaatgctggaagataaacgc
gatcagcaccagaccctgactgcggcggtactggcgcgagataccgcgcgcgccagtgag
ttaatgcgccagcatttactgacgccaattcccattatccagcaggcgatggctggcaat
taa
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