Escherichia sp. F1: ACK8NJ_06290
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Entry
ACK8NJ_06290 CDS
T11101
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
esf Escherichia sp. F1
Pathway
esf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
esf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ACK8NJ_06290 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esf03400
]
ACK8NJ_06290 (xseA)
Enzymes [BR:
esf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ACK8NJ_06290 (xseA)
DNA repair and recombination proteins [BR:
esf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ACK8NJ_06290 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
OMPdecase
DUF7310
DUF1993
Motif
Other DBs
NCBI-ProteinID:
XMR22256
LinkDB
All DBs
Position
complement(1323089..1324459)
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AA seq
456 aa
AA seq
DB search
MLPSQSSAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRC
AMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAK
LQAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDD
APGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHET
DVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRRFTQIH
HRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQPRIHRA
QTRIQQLEYRLAETLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQV
KQVKAGDTLTTRLNDGVVVSVVSDVAKTRKPRKKNS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgttaccttctcaatcctctgcaatttttaccgttagtcgcctgaatcaaacggttcgt
ctgctgcttgagcatgagatgggacaggtgtggatcagcggcgaaatttctaatttcaca
caaccggcttccggtcactggtactttacgcttaaagacgataccgcgcaggtgcgctgt
gcgatgttccgtaacagcaatcgacgggtgacctttcgcccacagcatgggcaacaggtt
ttagttcgcgccaatattacgctctacgagccgcgcggtgactaccaaataatcgtcgaa
agtatgcagcctgccggtgaagggttgctgcaacaaaagtacgaacagcttaaagcgaaa
ttacaggctgaaggtctgttcgatcagcaatacaaaaaaccacttccttcccctgcgcat
tgcgtcggtgtgatcacttcaaaaaccggtgctgcgctacatgatattttgcatgtgtta
aaacgtcgcgatccttctctgccggtgatcatctaccccaccgccgttcagggcgatgac
gcgccggggcaaattgttcgcgccattgagctggcgaatcagcgaaacgagtgcgacgtg
ttaatcgtcgggcgcggcggcggttcgctggaagatttatggagttttaacgacgaacgc
gtagcgcgggcgatttttgccagccgcattccggtagtgagtgccgtcgggcatgaaacc
gatgtgacgattgccgattttgtcgctgatttgcgtgcgccaacgccctcggccgccgct
gaagtagtgagccgcaatcagcaagagttactgcgccaggtgcaatcggcccgtcaacgg
ctggagatggcgatggattattatctcgccaaccgcacgcgtcgttttacgcagatccat
catcgcttgcagcagcagcatccacagctccggctggcacgccagcaaaccatgcttgaa
cgcctgcaaaaacggatgagctttgcgctggaaaatcagcttaagcgcgccgggcaacag
cagcagcggttaacgcagcggctaaaccagcaaaatccgcagccgcgtattcaccgcgca
cagacgcgaattcaacaactggaatatcgcctggcagaaacgttgcgcgcgcaactgagc
gcaacgcgagaacggtttggtaatgcagtaacgcacctggaagcagttagcccgctttcg
acgctggcgcgtggttatagcgtcaccagcgccgcagatggcgcggtgttaaagcaggtc
aaacaggtaaaagcgggcgatacgctgaccacgcgtttgaatgatggcgtggtggtaagc
gtagtgagcgacgtggcgaaaacccgcaaaccacgcaaaaaaaacagctaa
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