Escherichia sp. F1: ACK8NJ_12070
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Entry
ACK8NJ_12070 CDS
T11101
Symbol
ydcS
Name
(GenBank) putative ABC transporter substrate-binding protein YdcS
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
esf Escherichia sp. F1
Pathway
esf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
esf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACK8NJ_12070 (ydcS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
esf02000
]
ACK8NJ_12070 (ydcS)
Transporters [BR:
esf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ACK8NJ_12070 (ydcS)
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GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SBP_bac_6
Glyco_hydro_62
Ral
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
XMR18997
LinkDB
All DBs
Position
complement(2507731..2508876)
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AA seq
381 aa
AA seq
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MSKTFARSSLCALTMTIMTAHAAEPPTNLDKPEGRLDIIAWPGYIERGQTDKQYDWVTQF
EKETGCAVNAKTAATSDEMVSLMTKGGYDLVTASGDASLRLIMGKRVQPINTALIPNWKA
LDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPPDSWQVVFVEQNLPDGKSNKG
RVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRDQHSLIHRYWHDTT
VQMSDFKNEGVVASSAWPYQANALKAEGQPVATVFPKEGVTGWADTTMLHSEAKHPVCAY
KWMNWSLTPKVQGDVAAWFGSLPVVPEGCKASPLLGEKGCETNGFNYFDKIAFWKTPIAE
GGKFVPYSRWTQDYIAIMGGR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagacatttgcccgcagcagcctgtgtgcgctcaccatgacaataatgaccgct
cacgccgccgaaccgcctaccaatttagataaaccggaagggcgactggatattatcgcc
tggccgggatacatcgaacgcggacaaactgataaacaatacgactgggtaacgcaattc
gaaaaagagacaggctgcgcggtgaatgcgaaaaccgccgcgacttccgatgaaatggtc
agtctgatgaccaaagggggttacgatctggttacggcatccggcgatgcctcgctgcgc
ctgattatgggcaaacgcgtgcagccgattaataccgccttgattcccaactggaaagcg
ctcgatccgcgcgtggttaaaggcgactggtttaacgttggcggcaaagtttacggcaca
ccttaccaatgggggccgaacctgctgatgtacaacactaaaaccttcccgacgccgccg
gatagctggcaagtggtttttgttgagcagaatctgccggacggcaagagcaataaaggc
cgcgtccaggcttatgatggccctatctacattgcggacgctgcgttgttcgttaaagcc
actcagccgcagttgggcatcagcgatccgtatcaactcaccgaagaacagtaccaggcg
gtgctgaaagtgctgcgcgatcaacatagtttgatccatcgctactggcatgacactacc
gtgcaaatgagcgatttcaaaaacgagggtgtggttgcttccagtgcttggccctatcag
gccaacgccctgaaagccgaaggccagcctgtcgctaccgttttcccgaaagagggcgtt
accggttgggctgacaccaccatgctacatagcgaagcgaaacatccggtttgcgcctac
aaatggatgaactggtcattaaccccaaaagtgcagggcgatgtggcggcctggtttggc
tcgttaccagtagtgccggaagggtgtaaagccagtccgttattaggcgagaaaggttgt
gaaacaaacggttttaactatttcgataaaatcgccttctggaaaacgcctatagcagaa
gggggcaagtttgttccctacagtcgctggacgcaggattacattgccattatgggcggt
cgctaa
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