Escherichia sp. F1: ACK8NJ_15715
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Entry
ACK8NJ_15715 CDS
T11101
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
esf Escherichia sp. F1
Brite
KEGG Orthology (KO) [BR:
esf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
esf03009
]
ACK8NJ_15715 (rimO)
Enzymes [BR:
esf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACK8NJ_15715 (rimO)
Ribosome biogenesis [BR:
esf03009
]
Prokaryotic type
ribosomal protein modification factors
ACK8NJ_15715 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
XMR19656
LinkDB
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Position
3228248..3229573
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AA seq
441 aa
AA seq
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MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV
QESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP
KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR
LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL
RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW
NRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKP
GDILRVKVEHADEYDLWGSRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtaactccccagccgaaaatcggctttgtttcccttggctgtccgaaaaac
cttgtcgattcagagcgtattctcaccgaactacgcactgaaggttatgacgtggtaccg
agctatgacgatgcggacatggtgatcgtcaacacctgcggctttattgacagcgcggta
caagaatcactggaagccattggtgaagcgttgaatgaaaacggcaaggtaattgtgacc
ggttgtctgggggcaaaagaagatcagatccgcgaagtccacccgaaagtgctggaaatc
accgggcctcatagctatgagcaggttctggagcacgttcatcactacgtgccaaaaccg
aaacacaacccattcctgagcctggtgccagaacaaggcgtgaaactgacgccgcgtcat
tatgcctatctgaaaatttctgaaggctgtaatcaccgctgcaccttctgcattattccg
tctatgcgcggcgacctggtgagccgtccgattggcgaagtgttaagtgaagcgaaacgt
ctggtagatgcgggcgttaaagagattctggtgatctcgcaggatacttccgcctatggc
gttgatgttaaacatcgtactggcttccacaacggcgagccggtaaaaaccagcatggtc
agcctgtgcgaacagttatcgaaactggggatctggacacgtctgcactacgtttaccct
tatccgcatgtggacgacgtcatcccactgatggcagaaggcaaaatcctgccgtatctg
gacattccgttgcagcacgccagcccgcgcattctcaaactgatgaagcgtccgggttct
gtagatcgccaactggcgcgtatcaaacagtggcgcgaaatctgcccggaactgacccta
cgctcaacctttattgtcggcttccctggcgagacagaagaagatttccagatgctactc
gacttcctgaaagaagcgcgtctggatcgcgttggctgctttaaatacagcccggttgaa
ggtgcagacgccaatgccctgcctgaccaggttccggaagaagtgaaagaagaacgctgg
aaccgtttcatgcagctgcagcagcagatttccgccgagcgcctgcaagagaaagtgggc
cgtgaaattctggtgattatcgacgaagtggacgaagaaggcgcgattggtcgcagcatg
gcagatgcaccggaaatcgacggcgcggtttatctcaatggtgaaaccaacgttaagccg
ggtgatatcctgcgtgtgaaagtcgagcacgccgatgagtacgatttgtggggtagccgg
gtttaa
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