Escherichia sp. F1: ACK8NJ_19140
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Entry
ACK8NJ_19140 CDS
T11101
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
esf Escherichia sp. F1
Pathway
esf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACK8NJ_19140 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esf03019
]
ACK8NJ_19140 (pcnB)
Enzymes [BR:
esf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ACK8NJ_19140 (pcnB)
Messenger RNA biogenesis [BR:
esf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACK8NJ_19140 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
XMR23464
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All DBs
Position
3982752..3984149
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AA seq
465 aa
AA seq
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MFTRVANFCRKVLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMYRLNKAGY
EAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEV
ATFRGHHEGNISDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDY
VGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLND
IPPARLFEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMERIIEQVLK
NTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSL
AIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLV
KWWGEFQVSAPPDQKGMLNELDEEPSPRRRSRRPRKRAPRREGTA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atttttacccgagtcgctaatttttgccgcaaggtgctaagccgcgaggaaagcgaggct
gaacaggcagtcgcccgtccacaggtgacggtgatcccgcgtgagcagcatgctatttcc
cgcaaagatatcagtgaaaatgccctgaaggtaatgtacaggctcaataaagcgggatac
gaagcctggctggttggcggcggcgtgcgcgacctgttacttggcaaaaagccgaaagat
tttgacgtaaccactaacgccacgcctgaacaggtacgtaaactgttccgtaactgccgc
ctggtgggtcgccgtttccgtctggctcatgtgatgtttggcccggagattatcgaagtt
gcgaccttccgtggacatcacgaaggtaacatcagcgaccgcacgacctcccaacgcggg
caaaacggcatgttgctgcgcgacaacattttcggctccatcgaagaagacgcccagcgc
cgcgatttcactatcaacagcctgtattacagcgtggcagattttaccgtccgtgattac
gttggcggcatgaaggatctgaaagacggcgttatccgtctgattggtaacccggaaacg
cgctaccgtgaagatccggtacggatgctgcgcgcggtacgttttgccgccaaattgggt
atgcgtatcagtcctgaaaccgcagaaccgatccctcgcctggctaccctgctgaacgat
atcccaccggcacgtctgtttgaagaatctttgaaactgctgcaagcgggctacggttac
gaaacctataagctgctgtgtgaatatcatctgttccagccgctgttcccgaccattacc
cgctacttcacggaaaatggcgacagcccgatggagcggatcattgaacaggtgctgaag
aataccgatacgcgtatccataacgatatgcgcgtgaacccggcgttcctgtttgccgcc
atgttctggtacccactgctggagacggcacagaagatcgcccaggaaagcggcctgacc
tatcacgacgctttcgcgctggcgatgaacgacgtgctggacgaagcctgccgttcactg
gcgatcccgaaacgtctgacgacgttaacccgcgatatctggcagttgcagttgcgtatg
tcccgacgtcagggtaaacgcgcctggaaactgctggagcatcctaagttccgtgcggct
tatgacctgttggccttgcgagctgaagttgaacgtaacgctgaactgcagcgtcttgtg
aaatggtggggtgagttccaggtttccgcgccaccagaccaaaaagggatgctcaacgag
ctggatgaagagccgtcaccgcgtcgccgttctcgtcgtccacgcaaacgcgcaccgcgt
cgtgagggtaccgcatga
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