KEGG   Escherichia sp. F1: ACK8NJ_20055
Entry
ACK8NJ_20055      CDS       T11101                                 
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
  KO
K02344  DNA polymerase III subunit psi [EC:2.7.7.7]
Organism
esf  Escherichia sp. F1
Pathway
esf03030  DNA replication
esf03430  Mismatch repair
esf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:esf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ACK8NJ_20055 (holD)
   03430 Mismatch repair
    ACK8NJ_20055 (holD)
   03440 Homologous recombination
    ACK8NJ_20055 (holD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:esf03032]
    ACK8NJ_20055 (holD)
   03400 DNA repair and recombination proteins [BR:esf03400]
    ACK8NJ_20055 (holD)
Enzymes [BR:esf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ACK8NJ_20055 (holD)
DNA replication proteins [BR:esf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ACK8NJ_20055 (holD)
DNA repair and recombination proteins [BR:esf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ACK8NJ_20055 (holD)
SSDB
Motif
Pfam: DNA_III_psi CSTF_C
Other DBs
NCBI-ProteinID: XMR20438
LinkDB
Position
complement(4181706..4182119)
AA seq 137 aa
MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRA
LTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQVASPALTELRANPTARAA
LWQQICTYEHDFFPRND
NT seq 414 nt   +upstreamnt  +downstreamnt
atgacatcccgacgagactggcagttacagcaactgggcattacccagtggtcgctgcgt
cgccctggcgcgttgcagggggagattgcgattgcgatcccggcacacgtccgtctggtg
atggtggcaaacgatcttcccgccctgaccgatcctctggtgagcgatgttctgcgcgca
ttaaccgtcagccccgatcaagtgctgcaactgacgccagaaaaaatcgcgatgctgcca
caaggcagtcgctgcaacagctggcggttgggtactgacgaaccgctatcactggaaggc
gctcaggtggcatcgccggcgctcaccgaattacgggcaaacccaacggcacgcgccgcg
ttatggcaacaaatttgcacatatgaacacgatttcttccctcgaaacgactga

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