Enterobacter sichuanensis: C1N69_22065
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Entry
C1N69_22065 CDS
T06532
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
esh
Enterobacter sichuanensis
Pathway
esh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1N69_22065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esh03019
]
C1N69_22065
03400 DNA repair and recombination proteins [BR:
esh03400
]
C1N69_22065
Enzymes [BR:
esh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1N69_22065
Messenger RNA biogenesis [BR:
esh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C1N69_22065
DNA repair and recombination proteins [BR:
esh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C1N69_22065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QFQ11217
LinkDB
All DBs
Position
complement(4508538..4510367)
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEVLNQESLAKQVLHETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVP
ALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRTGQIRLLY
IAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMAL
TATADDTTRLDIVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGI
IYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEHWVSIIRQLIHLG
FATQNIAQHSALQLTEAARPVLRGDVELKLAVPRVVALKPRVMQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIR
SHADGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtattgaatcaggagtcgctggctaaacaggttttgcatgaaacc
tttggctaccagcagttccgccctggccaggaaaccatcattgaaacggtgctggaaggc
cgcgactgcctggtggtgatgccaaccggcggcggtaaatcgctctgttatcaggtgccc
gcgctggtgcttaacggcctgacggtggtggtatcgcccctgatttcgctgatgaaagac
caggtggaccagctgctcgctaacggcgtggcggcggcctgccttaactccacgcaatcc
cgcgagcagcagcaggaagtgatggccgggtgccgcaccgggcagatccgtctgctgtat
atcgcgcccgaacgcctgatgctggataacttcctcgaccatctcgcgcactggaacccg
gtgctgctggcggtggatgaagcgcactgtatctcccagtggggacacgatttccgtccg
gaatacgccgcactcggtcagctgcgtcagcgcttccccgagctgccgtttatggcgctt
accgccacggcagatgacaccacccgtctggatatcgttcgcctgctggggctgaacgac
ccctatattcaggtcagcagcttcgaccgccccaacatccgctatatgctgatggaaaaa
ttcaagccgctggatcagctcttacgctacgtgcaggagcagcgcggcaagtccggcatc
atctactgcaacagccgtgcgaaggtggaagacaccgccgcgcgcctgcaaaaccgcggc
tttagcgcggcggcttaccatgccgggctggaaaaccatatccgcgccgacgtgcaggaa
aaattccagcgcgacgacctgcagattgtggtggcgacggtggcgttcggcatggggatc
aacaagccaaacgtgcgctttgtggtgcacttcgacattccacgcaatatcgaatcttac
tatcaggaaaccggtcgcgctggacgcgacggtctgcctgcggaagcgatgctgttttac
gatccggccgatatggcgtggctgcgccgctgcctggaagagaaaccgcaggggcagttg
caggatatcgaacgtcacaagctcaacgcgatgggcgcatttgccgaagcgcaaacctgc
cgtcgcctggtgctgctcaactactttggtgaagggcgacaggagccgtgtggcaactgc
gatatttgcctcgatccgccgaaacagtacgatggtctgatggacgcgcgtaaggcgctc
tcgaccatttatcgtgtgaatcagcgcttcgggatgggctacgtggtggaagtgctgcgt
ggtgccaataaccagcgtatccgagatatgggccacgacaagctgccggtctacggtatt
ggcaaggatcagagccacgagcactgggtcagcattattcgtcagctgattcacctcggt
tttgctacacaaaacatcgcccagcactccgcgcttcagctcaccgaagccgcgcgcccg
gtgctgaggggggacgttgaactgaagcttgccgtgccgcgcgttgtcgccctgaagccg
cgggtgatgcaaaaatcgtacggcggcaactacgaccgcaagctgtttgccaaactgcgc
aagctgcgtaaagccatcgccgatgaagagaatatcccgccttacgtggtgttcaacgac
gcgacgctgatcgagatggccgaacagatgccgctgagcgccagcgaaatgctcagcgtg
aacggcgttggcacgcgcaagctggagcgttttggtaaggagtttatggcgcttatccgt
tcccatgctgacggtgatgatgaggagtag
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