Exiguobacterium sibiricum: Exig_1827
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Entry
Exig_1827 CDS
T00687
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
esi
Exiguobacterium sibiricum
Pathway
esi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Exig_1827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esi03019
]
Exig_1827
Messenger RNA biogenesis [BR:
esi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Exig_1827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Shikimate_DH
DUF7684
Motif
Other DBs
NCBI-ProteinID:
ACB61279
UniProt:
B1YI52
LinkDB
All DBs
Position
complement(1787177..1788841)
Genome browser
AA seq
554 aa
AA seq
DB search
MSKKKTEKVSVFALGGAGEIGKNMYVVELDEDIFVIDAGLMFPGDEMLGIDKVIPDISYL
KENKERIQGIFITHGHEDHIGALSYVLRDLKVPVYGTRLTLGLIEIKLKEAGLLKKADLR
PIDAKTKLTVAGHFITFFRVNHSIPDAVGVCIQTSQGAIVHTGDFKFDYTPVDGKQADFG
KIAAIGQRGVLCLLSDSTNAERPGMSGSESTVGSELNDVIYEAPGRVIVASFASNVHRLQ
QVFAAAEANNRKVAVVGRSMVNIVEVAQRLNYLRFKQKTLVELSDINRLDDNQVVILTTG
SQGEPMAALTRMARNAHKQVNIRLNDTVVVAASPIPGNEKSVSKTIDLLFRAGANVIYNQ
RKVHVSGHGHAEDLKLMLNLIKPKFFVPIHGEFRMQKAHSRLAQTIGVNANNIFIIENGD
VVEFEKRKARMSRKVNAGNVLIDGIGVGDVGNIVLRDRRLLSQDGVVLCVITISRKNKTI
VSGPEIISRGFVYMRESEDMINEANRIVAKQLQGKLTGELDWTEMKSLIRDKLSSYLYEQ
TKRRPMILPIIMEI
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagaaaaagacggaaaaggtaagcgtctttgctcttggtggcgccggtgaaatc
ggtaagaacatgtacgtcgtcgaactcgacgaggacatcttcgtaatcgatgccggatta
atgttcccaggagatgagatgcttggaattgataaagtcattccagacattagttattta
aaagaaaacaaagagcggatccaagggattttcatcacgcatggacacgaggaccatatt
ggtgccctcagttatgtcttacgggacttaaaagtgccggtgtatggaacacgcttaaca
ctgggtttaattgaaattaaattaaaagaagccggtttattgaaaaaggcagatcttcgt
ccaattgatgccaagacgaaattaaccgtagcaggtcatttcattacatttttccgtgtc
aatcactcgattccggatgcagtcggggtatgtatccaaacatcgcaaggggcaatcgta
cacacgggagattttaaatttgattacacaccggttgatggaaaacaagctgatttcgga
aaaattgccgcaattggtcagcggggagtcctttgtctcttatcagactcaactaacgct
gaacgtcccggaatgtccggatcggaatcaacggtcgggtcggaactcaacgacgtcatc
tacgaggcaccgggtcgcgtgatcgttgcgtcattcgcatcaaacgtccatcgtctgcaa
caagtctttgcagcggcagaagctaacaaccgtaaagtggccgttgtcggtcgcagtatg
gtcaatatcgtcgaagtggcacaacgcctgaactacttgcgtttcaaacaaaagacgttg
gtcgaactgtcggatatcaatcgactcgatgacaatcaagtcgtgattttaacaacgggc
tcgcaaggcgaaccgatggcagcactcacacgcatggcacggaatgcacacaagcaggtc
aacatccgtttaaatgatacagtcgtcgtcgcggcgtctccgattcccggaaacgaaaaa
tccgtttcgaaaacgattgatttgttgttccgcgccggtgcaaacgtcatctataaccag
cggaaagtgcatgtatccggtcacggacatgccgaagatttgaagttgatgctgaacttg
atcaaaccaaaattcttcgtcccgatccacggggaattccggatgcagaaggcacacagc
cgtttagcacaaacaattggtgtcaatgcaaataacatcttcatcattgaaaatggggat
gtcgtcgagttcgagaaacgtaaagcccggatgtcacgtaaagtgaatgccggaaacgtc
ttgattgacggaatcggtgtcggtgatgtcggaaacatcgtgttacgcgatcgtcgtctt
ctgtcgcaagacggtgtcgtcctttgtgtcatcacgatcagccgtaaaaacaaaacgatc
gtctccggaccagaaatcatttcacgtggattcgtctacatgcgtgaatcagaagatatg
atcaacgaagcgaaccggattgttgccaagcaactgcaaggtaaattaacaggtgagctt
gactggacggaaatgaagtcattgattcgtgacaagttaagttcgtatctttatgaacaa
acgaaacgtcgtccgatgattttaccgatcatcatggaaatctaa
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