Exiguobacterium sibiricum: Exig_1832
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Entry
Exig_1832 CDS
T00687
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
esi
Exiguobacterium sibiricum
Pathway
esi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Exig_1832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esi03019
]
Exig_1832
03016 Transfer RNA biogenesis [BR:
esi03016
]
Exig_1832
Enzymes [BR:
esi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Exig_1832
Messenger RNA biogenesis [BR:
esi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Exig_1832
Transfer RNA biogenesis [BR:
esi03016
]
Prokaryotic type
tRNA degradation factors
Exig_1832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
RNase_II_C_S1
S1_RRP5
OB_RRP5_4th
SPATA25
MIOX
Motif
Other DBs
NCBI-ProteinID:
ACB61284
UniProt:
B1YI57
LinkDB
All DBs
Position
complement(1793760..1795979)
Genome browser
AA seq
739 aa
AA seq
DB search
MSQTKQTFSTELGGRPLTIEIGQLAKQANGAALIRYGETAVLATVVASKQPKDLDFFPLT
VNYEEKLYAAGKIPGGFLKREGRPGENAILTSRLIDRPIRPLFPDGFRHDIQVATTVLSS
DEDNSPEVAAMIGASIALSISDIPFDGPIAGVTIGRVNGEFIINPTMSQASESDIDLQVA
GTKHAVNMVEAGAKEVSEQAMLEAILLGHDVIKELIAFQEEIVAAVGQEKFAYTVASFDE
TLVNRLKAEALAEVTTAVQVEEKQARDLAINEVISKYIDQYAADDSITEAQLAEVSGVLN
KFVKTEVRRLITEDKVRPDGRGLAEIRPLDSEIGLLPRAHGSGLFTRGQTQVLSVATLGV
AGDAQIIDGLGLKAEKRFMHHYNFPPFSVGEARPMRAPGRREIGHGALGERALLPVLPSE
TDFPYTIRLVSEVLESNGSSSQASICGSILAMMDAGVPLKAPVAGIAMGLIKEGENYSIL
TDIQGMEDHLGDMDFKVAGTKDGVTALQMDMKIGGITRQILEEALEQARLGRLHILEHMN
SVIAEPRVELSKYAPKIVTLKINPDKIRDVIGPGGKVINGIIDETGVKIDIDQDGTVFIA
STDQDGINHARQLIEDIVREVVIGEEFDGTVRRVEKFGAFVELFKGKDALVHISELALER
VGQTEDVVKLGDKLKVRVTEVDDKGRVNASHKVLLVEGMSPEDRAAYDEKKKTERDSRPP
RRDTGSRPPRDGQRPPRRN
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaacaaagcagacgttttcgaccgaactcggtggacgtccattaacaattgaa
atcggtcaactggccaaacaagcaaacggagcagcattgatccgttacggtgagacagca
gtccttgcgacggtcgtcgcatccaaacaaccaaaagacttagatttcttcccattaact
gtgaactatgaagaaaaactatatgcagcaggtaagattccaggtggtttcctaaaacgt
gaaggacgtccgggtgaaaatgcgattttgacatcacgtttgattgaccgtccgatccgt
ccgttgttcccagacggtttccgtcatgatatccaagtcgcaacgacagttttgtcttct
gacgaagataattcaccggaagtggcagcaatgattggggcatcgattgctttgtcgatt
tcagacattccatttgacggtccgattgccggcgtgacgattggtcgtgtgaacggtgag
ttcatcatcaatccgacgatgagtcaagcatctgaaagtgatatcgaccttcaagttgcc
ggaacgaaacatgcggtcaacatggtagaagccggagcaaaagaagtttcggaacaagca
atgcttgaagcgattctcctcggacatgacgtcattaaggaattgattgcgttccaagaa
gaaatcgtcgcagcagtcggacaagaaaagttcgcttacacggttgcttcgtttgacgaa
acactcgtcaaccgcttgaaagcagaggcgcttgcagaagtcacgacagccgttcaagtc
gaagaaaaacaagcacgtgatcttgctatcaatgaagtcatttcgaaatacatcgatcag
tacgcagcggatgactcaattacggaagctcaattagctgaagtatccggtgtcttaaat
aaattcgttaagacagaagtccgccgcttgatcacagaagataaagtccgtccagatggt
cgtggtcttgctgaaatccgtccgcttgattcggaaattggactgttgccacgggcacac
ggttcaggtctgttcacacgcggtcaaacacaagtcttgtccgtcgcaacgcttggtgtt
gctggagatgcacaaatcattgacggtcttggacttaaagcagagaaacgttttatgcac
cattataacttcccgccgttctctgtcggggaagctcgtccgatgcgcgcaccaggtcgt
cgtgaaattggtcacggagcactcggtgaacgtgccttgttaccggttcttccgtcagaa
acagatttcccgtacacgattcgtctcgtttcggaagtcctcgaatcaaacggttcgtct
tcacaggcgtcaatttgtggatcaattcttgcgatgatggatgcgggtgtgccgttgaaa
gcaccggttgccggaattgcaatgggcttgatcaaagaaggcgaaaattactcaatcttg
acagatatccaaggaatggaagatcacctcggcgatatggactttaaagttgctggaaca
aaagatggtgtgacggctttgcaaatggatatgaagattggcggaatcacgcgtcagatt
ttagaagaggcgcttgaacaagcacgtcttggtcgtttacacatcctggaacacatgaat
tcagtcattgctgaaccacgtgtcgagttgtctaaatatgcaccaaaaatcgtcacattg
aaaatcaatcctgataaaatccgtgatgtgattgggcccggcggtaaagtcatcaacggt
atcatcgatgagacaggtgtcaaaatcgatatcgatcaagacggtacagtctttatcgcg
tcaacggatcaagacggtatcaaccatgcgcgtcagttgattgaagatatcgttcgtgaa
gtcgtcatcggagaagaatttgacggtacggttcgccgcgtcgaaaaattcggagctttc
gtcgaattgttcaaagggaaagatgccctcgtgcatatctcggaactggcgcttgaacgt
gttggtcaaaccgaagatgtcgtcaaattaggcgataaattgaaagtacgtgtcacggaa
gtcgatgataaaggacgtgtcaatgcgtcgcataaagtccttctcgtggaaggtatgagt
ccagaagatcgtgccgcatatgatgaaaagaaaaaaacagagcgtgacagccgcccgccg
cgtcgggatactggatctcgcccaccacgtgacggacaacgtccaccacgtcgtaactaa
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