Exiguobacterium sibiricum: Exig_1927
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Entry
Exig_1927 CDS
T00687
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
esi
Exiguobacterium sibiricum
Pathway
esi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
esi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Exig_1927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esi03400
]
Exig_1927
Enzymes [BR:
esi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Exig_1927
DNA repair and recombination proteins [BR:
esi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Exig_1927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_30
TrwB_AAD_bind
ADDB_N
AAA_11
AAA_19
AAA_7
Phage_PBS1_41
Motif
Other DBs
NCBI-ProteinID:
ACB61379
UniProt:
B1YIQ3
LinkDB
All DBs
Position
complement(1884844..1887168)
Genome browser
AA seq
774 aa
AA seq
DB search
MIAEVIVDVAAATVDRPFDYEVPDLWRDLVVPGMRVEVPFGPRALLGIVVAVKDETDLAR
IKPIVRVLDETPTYTEELLQLSSYLSETTLCYQATALLAMLPAALKVSYDKLILAENPRL
IHWNQKKISQFPSEVQQQILVAAQNGDIRLQPIVKEKKTSKTDKRIRLLDSTIELSKQAT
KQILLREYLMARPEVLWSEVMHELDLTVSILNSLEKKGVITVETIDVNRNPYEHLVQDIF
VPSTLTTHQQDAVDAITASEETSTFLLHGVTGSGKTEVYLESIHTMLQRGRQAILLVPEI
SLTPMMVKRFKRRFGDRVAVLHSGLSLGEKYDEWRKISHGEVDVVVGARSAIFAPLTNIG
VIILDEEHETTYKQEENPRYHTRDVATWRAAYHKCPVVLGSATPILETYARSQKGVYRYL
PLKERFGGELPPVEIIDMRKELERSNRTPFSLPLVEGIKQRIERGEQTVLLLNRRGYTTF
VLCRDCGETLQCPHCAVNLTYHQHQDCLKCHYCGFEAAMPKTCPSCESKKIRQFGTGTQK
IEEELAHLIPEAKIIRMDQDTTSRKGAHEKLLNAFERGEGNILLGTQMIAKGLDFPNVTL
VGVIAADATLGIPDFRASERTFQLITQVSGRAGRGALAGQSIIQTYNPDHYVIQTAKRHD
YEAFYQREMQLRKLGGHPPFWFLGLVTISAAHPLEAQAEAEAIAGELRHLESDDLIVNGP
LEAPLARLKNMYRYQVILKHKGQEEVREALRAMLALRIKQKVQVTVDLNPFVFM
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgattgccgaagtcatcgtcgatgtcgcggcggcgacggtcgaccggccatttgattat
gaagtaccggatttatggcgtgatctcgttgttcccggtatgcgtgtcgaagtgccgttc
ggtccgcgggcgttgctcggaatcgtcgtagccgtgaaggacgagacggatctcgcgcgc
atcaaaccgattgtacgcgttctcgatgagacaccgacgtacacggaagaattgctccaa
ctatcgagttacctgtccgagacgaccctttgctatcaggcaacggcactacttgcgatg
ttgcccgctgctttgaaagtcagttatgataaactgattttggcggaaaatccgcggctg
attcactggaaccagaagaaaatcagccagtttccgagtgaggtccaacaacagatatta
gtggctgcccaaaatggggatatccgactgcaaccgatcgtcaaagaaaagaagacgtcc
aaaaccgacaagcggattcgtctgctcgattcgacgattgaattatcgaaacaagcgaca
aaacagattctgctccgtgagtatctgatggcacgtccggaagtgttatggagtgaagtg
atgcatgaactggatttgactgtcagcatccttaacagtttagagaaaaaaggtgtcatt
acggtcgagacaattgatgtaaatcgcaatccgtacgaacatctcgtccaagatatcttt
gttccgtccaccctgacgacacatcagcaggatgcggtcgatgcgatcacggcatcggaa
gagacgagtacgtttttactccacggggtgaccggcagcgggaaaacggaagtctatttg
gaatcgattcatacaatgcttcagcgggggcgccaagcgattttgctcgtaccggaaatc
agtttgacgccgatgatggtcaaacgttttaaacgccggttcggggatcgggtggctgtg
ctgcacagcggtctgtcgttaggtgaaaaatacgatgaatggcggaaaatttcccacgga
gaagttgatgtcgtggtcggggcacgttctgcgatttttgcaccgttgacgaatatcggt
gtcatcattttggatgaagaacatgaaacgacgtataaacaggaagaaaatccgcggtat
catacccgggatgtggccacgtggcgagcggcatatcacaaatgtcccgtcgtccttgga
agtgcgacgccgattctagaaacgtatgcacgttctcagaaaggggtctatcgttacctc
cctctaaaagaacgattcggaggcgaacttccaccggtcgagatcatcgatatgcgaaaa
gaactggaacgcagcaatcgaacaccgttcagcctgcctcttgtcgaaggaatcaaacaa
cgcatcgaacggggcgaacagacggtcctgctcctcaatcgacggggatacacgacgttt
gtcctgtgtcgggattgtggtgaaacgcttcaatgcccacattgcgccgtcaatctgacc
tatcatcaacaccaggattgtctgaaatgtcattattgtggatttgaagcagccatgccg
aaaacctgtccgtcctgtgaatcgaaaaaaattcggcagttcggtaccgggacgcaaaaa
atcgaagaagaactggcccatttgattccggaagccaaaatcatccgcatggatcaagat
acgacgtcacgcaaaggcgcgcatgaaaaattattgaatgcgtttgagcgcggtgaagga
aacatcctgctcggaacccaaatgattgccaaagggcttgattttccgaacgtgacactg
gtcggtgtcattgcggcggatgcaacactcgggattcctgatttccgggcgagtgaacga
acgtttcaactgattacgcaagtttcaggtcgtgccggccggggagcgcttgccggacaa
tcgattattcagacttataatccggatcattacgtcatccagacggcgaaacgtcatgat
tatgaagcgttttatcagcgagaaatgcagttacgtaagttaggcggacaccctccgttc
tggtttttaggactagtgacgatttcagcagctcatccgctcgaagcacaagcggaagca
gaagcgattgcaggagaactccggcatctggaatcagacgatttaattgtcaacggtccg
cttgaagcaccgctggcacggctaaaaaacatgtaccgataccaggtgattctaaaacat
aaaggtcaagaagaagtgcgggaggcactccgtgcgatgcttgcattacgcatcaaacaa
aaagtccaagtaacagtggatttgaatccatttgtattcatgtga
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