Exiguobacterium sibiricum: Exig_2216
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Entry
Exig_2216 CDS
T00687
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
esi
Exiguobacterium sibiricum
Pathway
esi03030
DNA replication
esi03430
Mismatch repair
esi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
esi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Exig_2216
03430 Mismatch repair
Exig_2216
03440 Homologous recombination
Exig_2216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esi03032
]
Exig_2216
03400 DNA repair and recombination proteins [BR:
esi03400
]
Exig_2216
Enzymes [BR:
esi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Exig_2216
DNA replication proteins [BR:
esi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Exig_2216
DNA repair and recombination proteins [BR:
esi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Exig_2216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACB61668
UniProt:
B1YKB5
LinkDB
All DBs
Position
complement(2180679..2183846)
Genome browser
AA seq
1055 aa
AA seq
DB search
MVQLNVRTAYSPLQSTIRMDRYLDEVKRRGFSAAAICETSLTGVPAFMAGCKQRELIPIV
GFEQVIEPDELTILWYAKTSLGLKVLYRLASEMPVEDYSELIAVLEPKRQAPEDEARLRR
LVAQWMGSAHKATILLGVKAVRSTVERDSRERYRQAANALGIETIPIDPVRYLFREEADA
FQALRAIDEGTMFAEQKVSRSAHLKLTEELQDQFTDRELRLLTRWAESQETLTLPFQSRP
LPQVTDDSNHALNRLAHDGLLAHGHVGEEATKRLQYELEVIEKTGFADYFLIVEDLVRHA
KSEGIRVGPGRGSAAGSLVSYALGITTVDPLKYGLLFERFLNPERITMPDIDIDIEDARR
EEVLEYLVERYGKQHVGQIGTLSTLGAKAALRDVARALEFSKDETDAAAKQLGKVTTLQG
LEQQASIYRWFSGSEKRRQLLQLAQAIEGLPRQRSIHAAGVIIGSEELIETTPVDLHASG
RFVTQYLMKAIEQQGLLKIDLLGLRNLTRLRQMEQLIQHAYPDFSVERIPDEDKATLRLF
AKGETDQIFQFESAGMKQTLREVKPNRFEDLVATMSLFRPGPMKFIDLYAKRKAGQPYQM
VHPILEEILTATYGVIVYQEQIMEITRRVAGFTLAQADLLRRAISKKSSQSVEAEKKRFI
EGALQNGFDLTVAETLYDQIERFAGYGFNRSHAVAYTKISYALGYMKAHYPQIFSLVSID
QPERLVRVMREKRLPVLPPDIWMSDFRSTLEGKGIRLGIQTLRGITEKDFHTLREAAKTS
QTITQLLSAVGWGKKERAKIELLLYSGAFDRSTHGDRGLAEQEVLDYFTMASNTLLPDEL
ASLGRRKTTTQTNRTATDWARLERESLGFWLTYSPLMTAMKPPVETTHFQTLSLEGNQTN
YLVCYIEQIREFKTKRAQTMAVIHAVDGYTTEEVVVFPQQYAAFKRSLYIGNVLLIEVKV
QEREGDRQFVLERLRPLGQDVLFVKLPSKNDLAVLERMLESAPGDIPVVVRYADTNETKP
LPGIYAVQQEEELMAQLRIRFGEANIILKNVPRSN
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggtccaactaaatgtccgtacagcatacagtccgttgcaaagtacgattcggatggat
cgttatctcgatgaagtgaagcgacgcggcttttcggctgcggcgatttgtgagacttct
ttgacaggcgtcccggcatttatggcaggctgtaagcaacgggaactgattccgatcgtc
ggattcgaacaagtcatagaaccggatgaacttacgattctatggtatgcgaaaacaagc
cttggattaaaagtactttaccggctggccagtgaaatgccggttgaagattactcggag
ctgattgccgtcctcgaaccgaaacgtcaggcaccggaagatgaagcgcgcttgcggcgt
ctcgtcgcccagtggatgggatcagcacacaaagccacgattttacttggtgtcaaggca
gtccgttcgactgttgaacgcgacagcagggaacgataccgtcaagcggcaaatgccctg
ggaattgaaacgattccgattgatcccgtccgttatctctttcgcgaagaggcagatgcg
tttcaagccctgcgtgccattgacgaaggtacgatgttcgctgaacaaaaggtcagccga
tcggctcatcttaaactgacggaagaattacaggatcagtttacggaccgggaattgcgg
ttgttaacacggtgggcggagtcgcaggagacgctgacgttaccttttcaatcgcgtcct
cttccacaggtgacggatgattcgaatcacgccctgaaccggttggcgcacgatggttta
cttgcacatggacatgtcggggaagaagcgacgaaacggctgcagtatgaactcgaagtt
attgaaaaaacaggatttgcggactattttctgattgttgaagatttggttcgccacgcg
aaaagtgaaggaatccgtgtcggcccgggacgtggatcggctgccggatcactcgtcagt
tatgccctcgggattacgactgtcgatccgctgaagtacggtttgttatttgaacggttc
ctgaatccggaacggatcacgatgcctgatatcgatattgacattgaagatgcgcggcgg
gaggaagtgcttgagtacctggtcgagcggtacggcaagcaacatgtcggtcaaatcgga
acgttatcgactcttggagcgaaagccgccctgcgtgatgtagcacgggcattggaattt
tcgaaagatgaaaccgacgcggcggcaaaacaattgggaaaagtgacgacgctacaaggg
ctcgagcaacaagcatccatttaccgctggttctcgggcagtgaaaaacgacgtcaattg
ttacagctggctcaagcgattgaaggattaccgagacaacgttcgattcatgctgccggc
gtcatcatcggttcagaggaattgatcgagacgacaccggttgatttacatgcaagtgga
cggttcgtcacacaatatttaatgaaggcaatcgaacaacaaggtttgctgaagatcgac
ttgcttggattacgtaatttaacacggttacggcagatggagcagttgattcagcatgcg
taccctgatttctcggtcgaacggataccggacgaggacaaagcgacgttacggttgttt
gccaaaggagagacggatcaaatcttccaatttgaatcggcagggatgaaacagacgctg
cgcgaagtcaagccgaaccggtttgaggatttagtcgcgacgatgtcactgttccgtccg
ggaccgatgaagttcatcgatctctatgcgaaacgaaaagccggtcaaccttatcaaatg
gttcatccgattttagaagaaattttaaccgcgacctacggcgttatcgtctatcaggaa
caaatcatggagattacacgccgggttgccggatttacgctggctcaagccgatttgctg
cggcgggcgatttcgaaaaaaagcagtcagtctgtagaagcggaaaagaaacgttttatc
gaaggggcattgcaaaacggttttgatttaacggttgccgaaacgttgtacgatcaaatc
gaacggtttgccggttatggatttaatcgcagtcatgctgttgcctataccaaaatcagt
tatgcactcggatatatgaaagcccattatccgcaaatcttttcattggtatcgattgat
caaccggaacgtctcgtccgcgtcatgcgggaaaaacggcttccggtattgccgcccgat
atttggatgtcggatttccgttcgacattagaaggcaaaggaatccggctcggaattcag
acgcttcggggaattacggaaaaagactttcatacgttacgtgaagccgcgaaaacctcg
cagacgatcacacagttattgtcggcagtcgggtgggggaaaaaggaacgggcgaagatt
gagctgttgttgtacagcggggcgtttgatcgttcgactcatggagaccgggggcttgca
gaacaggaggtcctcgactactttacgatggcttcgaatacgctgcttccggacgaactc
gcaagccttggacggagaaaaacaacaacacaaacgaaccggacagcaaccgattgggca
cgccttgagcgcgagtcacttggattttggctgacctattctccgttgatgaccgcgatg
aagccgcctgttgagacgacacatttccaaaccctctcgctggaagggaatcaaaccaac
tacttggtttgttatattgagcaaatccgtgaattcaaaacgaagcgtgcccagacaatg
gcagtcattcatgccgtcgacgggtatacgacggaggaagtcgttgtctttccgcaacag
tatgccgcgttcaaacgttcgttgtatatcggaaacgtgctgttgattgaagtgaaggtg
caggaacgtgagggagatcgtcaattcgtcctcgagcggttgcgtcctttggggcaggac
gtcttattcgtcaaactgccgtctaaaaatgatctcgctgttctggaacggatgctcgaa
tcggccccgggtgatattccggtcgtcgtacgttatgccgatacgaatgaaaccaagccg
ttaccgggaatttatgccgttcagcaggaagaggaattgatggcccaactccggattcgc
ttcggggaagcgaatatcatcctgaaaaatgtgccgcgttcgaactag
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integrated database retrieval system
