Euwallacea similis: 136409041
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Entry
136409041 CDS
T10684
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
esim Euwallacea similis
Pathway
esim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136409041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esim03019
]
136409041
03012 Translation factors [BR:
esim03012
]
136409041
Enzymes [BR:
esim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136409041
Messenger RNA biogenesis [BR:
esim03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
136409041
Translation factors [BR:
esim03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
136409041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_N
HA2_C
nSTAND3
ResIII
AAA_22
AAA_19
ATPase
AAA_14
Rad17
AAA_23
PhoH
Cas3-like_C_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
136409041
NCBI-ProteinID:
XP_066246427
LinkDB
All DBs
Position
1:complement(1971240..1975739)
Genome browser
AA seq
979 aa
AA seq
DB search
MTGRRKNWRYKPSNDRGEPRQHSNDRGEPRRYDQRPKGLKGREIGLWYANKAKQKREMLL
EAGGEGASSVIAREEFKKQKVLENQARANSRPLGSILVSSNKKDNIEKLLNETSLLYPSK
FSEKTTSYEHLEETDFKHEFLTHITGNIIEKLKSNGGAKYQYNNDYENTLLLEELQGKSQ
SRTYQEMQKIRNKLPSMGIKNQVIDLIEKNQIAVISGETGCGKTTQVAQFILDDYIKKGK
GSQCKIVCTQPRRISAISVAERVASERDEKLGRSVGFQIRLEKVMPRDRGSILFCTTGVL
LKFMESDPALTQVSHLILDEIHERDVTCDFLITVLKDVIKYRSDIKIILMSATLNSEAFS
KYYDNAPHINIPGFTYPVTEFYLEDVLQMTGYKFKEEPRKWVVAKNRRKHKEWSEYIEPY
IRQLETEQKYDRNVIQELRKMESESLDILLIYELLVHICEKMADDDGTILIFVPGFADIS
KFCTMLRDSGRFDQVKYIVIPLHSQLPTVDQKQIFKPAPKGMRKIIISTNIAETSITIDD
VITVIDCGYIKMSNLDAETGIETLDVELVSQANASQRKGRAGRVKPGVCYHLISKIRYQL
LDKFLKPEVLRKRLEDVILQLKMLQLGEAEPFLGKLMDPPESKSVQTSLTLLQRLGALDS
EENLTPLGFHMAKLPIPAQCSKMLILAAMFSCVDPVLSVAASLGYKDAYQLSISSDNKSN
NADKMKYELSRGTNSDHICMHYAIRGYEDAHNPYSFCRKYFLSSATLKLLKDMRKQFAEH
LYEMKFISSSNPRSPGHNRNSDNMGLIKAIIAAGLYPNIAIITKVRRGGAQLRTVNHERM
EFHPKSVLQQAKSFPSPLIAYHLRLKSSKIYVHDGTVVFPLSLVFFGDQFKIHSEENDQN
AFKGVSVNQNMKFLCSQSTSFAVQRLRDRLTQILEWKIAHPGQVDWNQDSPELKILKAIM
DMIATEDGENLDLSDYDDM
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgactggaagaaggaagaattggaggtataaaccttccaatgatagaggtgagccaaga
caacattccaatgatagaggtgagccaagaaggtacgatcagagaccaaagggcttgaag
ggaagagaaattggactttggtatgctaacaaagcaaaacaaaagcgggaaatgctctta
gaggctgggggagaaggggccagttctgtgattgcaagggaggaatttaaaaagcagaaa
gtcttggaaaatcaagcgagagctaatagcagacccctggggtctatattagtttctagt
aataaaaaagataacattgaaaagctactgaacgaaacttctttactatacccatcaaaa
ttctctgagaaaacaacatcttatgagcatttggaagagaccgactttaagcacgaattt
ttaacccatatcactggcaatattattgaaaaattaaagtccaatggaggggccaagtat
caatacaacaatgattatgaaaacacattacttctggaagaactgcaagggaagtcacaa
agtagaacttatcaagaaatgcaaaagattcgtaataagttgccatcaatggggataaaa
aatcaagtgattgatttaatagaaaaaaatcaaattgctgtaataagtggagaaactggc
tgtggcaaaactacccaggttgcccagttcattctggatgattatatcaaaaaggggaaa
ggctcccagtgcaaaatcgtctgcactcagccaagaaggattagtgccatttcagtggct
gaaagggttgcctcagaacgagatgaaaaattgggacgcagtgtagggtttcaaattcgt
cttgaaaaagtgatgcctagggaccgaggatctattctgttttgcaccaccggagtgtta
cttaaattcatggaaagtgatccagcactgactcaagtatcccatctaattttagatgag
attcatgaaagggacgtaacctgcgatttcctaatcacagtcctcaaagatgtaattaaa
tatcggagtgatataaaaataatactcatgagcgccactttgaactcagaagcgttctcg
aagtattacgacaacgcgcctcatattaatattcctgggtttacatatcctgtgacggag
ttctatctggaggatgttttgcaaatgactggttacaagttcaaggaagagccaagaaaa
tgggtcgtggcgaaaaatcgtcggaagcataaagagtggtctgaatatattgaaccttat
attcggcagttggagacagagcaaaaatatgataggaatgttattcaggagctccgcaaa
atggaaagtgaatcgttagatatcttgttaatttacgaacttttagttcatatttgtgag
aagatggcagatgacgatggaacaatattaattttcgttccgggcttcgctgatatttcc
aagttctgcaccatgttaagggattcggggcgcttcgatcaagttaaatacatcgtaatt
cctttacattcccaactgccaaccgttgatcagaaacaaatatttaaacccgcccccaaa
ggtatgcgaaaaattataatttccaccaacatagcagaaacttctattacaattgacgac
gtaatcacggtaattgattgcgggtatataaaaatgtccaatttagatgcggaaaccgga
attgagaccttagatgtagaattggtttcacaagccaatgcttcccaaagaaaaggtcgt
gcgggtcgcgtaaaacctggtgtttgttatcatttaatttccaaaatccgatatcaactg
ctagacaaatttctgaagcctgaagtgttacgcaagaggctggaggatgtgattcttcaa
ttgaagatgctgcagttaggggaagcagaaccgttcttgggaaaactaatggatcctccg
gaatccaagtcggtacaaacatcgttaaccctactccagaggctcggagctttagacagt
gaagagaatttgacacctttgggatttcatatggcaaaattgccgattcctgctcagtgt
tctaagatgttgattttagccgcaatgttcagctgtgtagatcctgtcctgtctgttgca
gcatctttaggctataaagatgcgtatcagttaagcatatccagtgataataaaagtaat
aatgcggataaaatgaagtacgagttgtctagaggcaccaacagcgatcatatttgcatg
cattatgccattcgtggatatgaagatgctcacaatccatattcattttgtcgtaaatat
ttccttagttccgccactttaaaattactgaaagacatgcgtaagcaatttgctgaacac
ctttatgaaatgaagtttattagcagttccaaccccagaagtccgggacataatcgcaac
agcgacaatatgggacttattaaagcgatcatagctgcaggattataccccaatattgct
attatcaccaaagtccgcagagggggggcgcaacttcgaactgttaaccatgaaagaatg
gagtttcatccaaagtctgtcctccaacaagccaaatcgttcccgtcgcctttaatagcg
tatcatttacgtttaaaatccagtaagatttacgttcatgatgggactgttgttttcccc
ttatctcttgttttcttcggggatcaattcaagatacatagcgaagaaaatgatcaaaat
gcatttaagggagtatcagtaaatcaaaatatgaagtttttgtgtagccaatctacctcg
tttgccgtgcaaaggctgcgtgatagacttactcaaattttggagtggaagatcgctcat
ccaggacaagtggattggaaccaagactctcctgaactgaaaatactgaaggcaataatg
gatatgatcgcaacagaagatggtgagaatttagacttaagtgattatgatgacatgtaa
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