Euwallacea similis: 136411959
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Entry
136411959 CDS
T10684
Symbol
Mp
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
esim Euwallacea similis
Brite
Exosome [BR:
esim04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136411959 (Mp)
Proteoglycans [BR:
esim00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
136411959 (Mp)
Glycosaminoglycan binding proteins [BR:
esim00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136411959 (Mp)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136411959
NCBI-ProteinID:
XP_066250860
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Position
11:1143105..1352698
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AA seq
1178 aa
AA seq
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MVLSLRISRALPVAIVWLFLTPSTGEQDSFELPASFTQGESPKVFEYNLLDAVTIPLQDH
KTQYVGESEDGFPAFGFRVGSDVKMAYKQILPDTLSEEFAVLINAKPETKNGGFIFAIVN
SLETIVELGVRIAPENGSSTVLSLYYTDVLSEVSSHALANFTVPKFSNKWTRFAFGITMD
DVTLFFNCSQAGTVPVNRTPMKLGFESASTLYLAQAGPLIAGAFEGTLSHVKIYADPGMA
AQQCKTDFQSLMDLQGDDIDDNNLDIKESDEDNEISQDINYLVERTDYPPFRREDVDGLG
TFPPPPPPPDGKACPCGGLEDCCNFLFNDLHAAGKYKGEKGDRGTKGPPGEAIRGPPGPP
GPPGLPGPAAPEGSCPCNASSILSAIGLPSPYSPAIEKEGLPGLPGSPGRPGERGLPGPR
GDKGERGERGPPGPPGPPGGRGDEGKEGSPGPPGPPGPSGPPGPTEIDGVNVGDLKKGSS
GVPIIRPGIPGSKGEPGHTGEKGAKGDRGPIGPKGAGGTKGERGDRGLPGEKGPNGQKGD
SGTDGFPGTPGPPGHKGEPGVPGTPGLPGVLTTNGSTAVIDGQPGPPGVDGLPGTKGEAG
EKGARGPLGSQGLPGEKGASGSDGALGPVGPPGSKGEKGERGPPGDIYLHRVGQTDQKIT
PIKGEKGDLGRRGRRGKPGPPGPPGVIGKGGEGSLQGWTVRPGPTGPPGPLGPKGEKGDS
WGGGSGLKGEKGDKGDRGSDGKDGQPGRDSESRIIAVPGPPGPPGPPGLPGLSITGPKGE
PGESVFSEPLFNIRPGAQSNMEELRAVQELTDLKDLRTEAAGRSTAAPPIAHAVTQKKTE
TPMSGAMAFKSRNMMLEATKGSPIGTMVYIIEEESLLVRVNAGWQYVALGALLHTVPSPG
AVPSTRAPPQVHHPFESSNLVTQDVLSKTSNQIPQLPRLPEIVPHKVHVTSRPEFHVRPG
QSPEEAKATQFAALRIAALNEPYSGNAGGVRGADYDCYREAHRAGLKGTFRAFLSSRAQD
VSSIVRQVDRVLPVSNLRGEVLFDSWMDIFEGRGAPFSHQPRIFSFNGKNVMTDPHWPIK
SAWHGALLDGTRALDTSCEAWHTSHYGKVGLAGNLKGQMLLDQNPMPCDKKLILLCVEAT
SEIFVQRRRRSTMENDNRNINDNLMSEQQYHQFLNSIH
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggtgctttccctcaggataagtcgtgctctgccagtggccattgtttggctattcctg
acaccatcaactggtgagcaagattccttcgagctgccagcatcatttacacagggtgaa
agcccaaaagtcttcgagtacaatctcctagatgccgttaccatccctcttcaggaccac
aaaacgcaatacgtaggcgaaagcgaagatggattcccagcttttggttttcgggtcggg
tccgacgtgaaaatggcctacaagcagattcttcctgataccttaagtgaagaatttgca
gttctcatcaatgcaaagccagaaacaaaaaacggaggcttcatattcgcaattgtgaat
tccctggagactattgtggaactcggtgttagaatagctccagagaacgggtcatcgact
gtcctctctctctattatactgatgtgctcagcgaggtgtcttcgcacgctctcgctaac
ttcacagtaccgaagttctccaataaatggactagattcgccttcggtattacgatggat
gacgtcaccttgttcttcaattgcagccaagctggcacagtcccagttaaccgaacaccc
atgaagcttggctttgagtctgcgtcaacgctgtacttggctcaagccgggcctctgatt
gccggagctttcgagggtacattatcccacgtgaaaatatatgcagatccagggatggca
gcgcaacaatgcaaaacggattttcagagtttgatggatttgcaaggagatgacatagat
gataataatttagatataaaagaatccgacgaagacaacgaaattagccaggatataaat
tatcttgtggagaggacagattaccccccgttccgcagggaggacgtcgacggtttgggg
acgtttccgcccccgccgccgcctccagacggtaaagcttgtccttgtggcggcctcgag
gattgctgtaatttcctttttaatgatttacatgcagcgggaaaatataaaggagagaaa
ggagatcgtgggaccaaaggaccgccaggtgaagcaataagaggacccccaggaccacca
ggacctccgggcttacctgggcctgcagcccctgagggttcctgtccatgcaatgcatct
tcaattttgagcgcaatagggttaccttccccatactccccagcaatagaaaaggagggg
ctgccagggcttccagggtcaccagggcgacctggagaaagaggcctacctggtcctagg
ggtgataaaggagagagaggtgaaagaggtcctccaggccctccaggcccacctggaggt
agaggtgacgaaggtaaagaaggatctcctggcccaccaggcccaccaggccccagtggc
cctccggggcctaccgagatagacggcgttaatgtcggagacctcaaaaagggttcttct
ggtgttccaatcatacgtccaggaatacctggaagtaaaggagagccgggacatacaggg
gaaaagggcgctaagggggacagaggtcctatcggaccaaaaggagcaggaggtactaaa
ggtgaaagaggagatagaggattgcctggtgaaaaggggcctaatggtcaaaaaggagat
tctgggaccgatgggtttcctggcacgccgggccctccaggacataaaggtgagcctgga
gtcccaggaacacccggtttgcctggagtgctaactaccaatggcagcaccgctgtaatc
gatggtcaaccgggtcctccaggagtcgacgggctccctggcactaaaggtgaagctggg
gaaaaaggtgctagagggccattgggctctcaaggattgcctggtgagaaaggagcatct
ggcagtgatggtgctttgggtccagtggggcccccaggttctaaaggtgaaaaaggagag
cgtggacctccaggggatatatatttacacagggtaggacaaacagatcagaaaatcact
ccgataaagggcgaaaaaggcgatttaggacgacgagggcgacgaggcaagcctggacct
cctggtccaccaggggtgataggcaagggtggagagggaagtctacaaggatggacggtt
aggccaggaccaactggaccgccgggcccactagggcccaaaggtgaaaaaggagattcc
tggggtggtggatctgggcttaagggtgaaaagggcgataagggagatcgaggaagtgat
ggcaaagacggacaacctgggagagactccgaaagcagaattattgcagtgcctggacct
ccgggtccaccaggaccaccaggattgccagggttgtccattactggacctaaaggcgaa
cctggtgaatcagttttcagcgagcctctattcaacatacgaccaggagcccaaagcaac
atggaggaacttagagcagtgcaggaattaaccgacttaaaggatctgagaacagaagca
gcaggtcgttccacagcagctccgcctatagcacatgctgtaacgcaaaaaaagaccgag
actcctatgtctggagcgatggcattcaaatccaggaatatgatgcttgaggcgacaaag
gggagccctattgggacaatggtatacattattgaggaggaatccttgttagtacgggtg
aatgcaggatggcagtatgtcgcgttgggagcgctattgcatacagttccgtcaccgggg
gcagtaccatctaccagagcaccgcctcaagtacatcatccattcgagtcgagcaatctc
gttacacaggatgtgttgtccaagacatccaatcaaatacctcaactacctcgactgcca
gaaattgtgccccacaaggtgcatgtgacttcaaggccagagttccacgtgagacctgga
cagtcaccagaggaagccaaagctactcagtttgcagcgttacgaatagctgcactcaac
gaaccatattcagggaacgctggaggggtgcggggagcggattatgactgttaccgagag
gcccatcgagccggactaaaaggcactttcagagcatttctttcatctcgagcacaagat
gtcagttcaatcgtcagacaagtggaccgagtgctaccagtcagcaacctcagaggggag
gtactcttcgattcgtggatggatatattcgaaggaagaggagctccattctctcaccaa
cccagaattttctcatttaacggtaagaacgtgatgaccgaccctcactggccaatcaaa
tcggcctggcatggagccctgctggatggtaccagagcattagatacgtcatgcgaagct
tggcacacatcacactatggcaaagtaggtctcgcgggcaaccttaaaggacaaatgtta
ctagatcaaaatccgatgccctgcgacaagaagctaatcctcctctgtgtagaggcaacc
agcgaaatatttgttcaaaggagacgaaggagtacgatggagaacgacaatagaaacatc
aatgacaacctgatgtcagagcaacaatatcatcaattcctgaactccattcactaa
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