Euwallacea similis: 136412238
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Entry
136412238 CDS
T10684
Symbol
Msh6
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
esim Euwallacea similis
Pathway
esim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
esim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
136412238 (Msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esim03400
]
136412238 (Msh6)
DNA repair and recombination proteins [BR:
esim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
136412238 (Msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
136412238
NCBI-ProteinID:
XP_066251344
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Position
11:3130655..3138273
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AA seq
1147 aa
AA seq
DB search
MSRNQKPAPAQKNTLFKYFNSPKTPTTPKSSETASPSLVKDSRPSPVSVASGCGTPSIHK
NKKTKLEINPDDSGEELQITKSTKRRRIALLDSDSEPENESPNKRKSPKEKDPPAKRHRI
QPQSSDSESEEESPISSKKKIQGSDVAENSEHKSFVGSFSYSIREEKSEIEFGNNSKAGK
VKTKSAGDANIDSGWIHNTLDFLKPEKIRDAEKRRPSEPDYDSRTLHVPQTYLNSLTPAM
RQWWILKSQHMDSVLFFKVGKFYELYHMDAVIGVQQLGFSYMKGDFAHSGFPEGGYSKMA
TMLIDKGFRVARVEQTETPDMMAERCKTMKKTTKFDKVVSREICQVTTKASCVYGAQMPE
ARSEMGNYLCAITVKVNPDNTSRLGICFTETSIGTFYLSEFDDDKHCSKLLTLFAEYPPY
LILTERGVNYGHLKYLLNTQLKDIKQEVLAAKTQFYEAAITLENLFSACYFKTKNGKFEW
PKLFEEVAEDCNPKPEYELALKSLGAIHWFLKRSFLDIQLFSMGLFEKYEPVDSQAVPLN
KHIERDYMVLDSTALQSLSLLGGPGTLQKTLDFCKTPFGKRLLPQFICRPLCNLDKIKLR
QGAVKELYENPQKLQTCQEFLKKLPDLERQVAKIHTYGNKFCVTSHPDGRAILYETKTYS
KRKILDLLNTLRGFEASQEIDAIFKECESRLLRKLTQFEPNGMNIDLTETLTFFKQAFNH
EAAEKEGKIIPKRGVEHDFDEAEDQIEEINEQLKQYLKQQSTFFGCQVSYFGTDKKRFQL
EVPEHRASKADSKYQLEGHKKGAKPAKRFSTPRSRELLQDMLKAEAERNKIILDLNRRIF
EKFSLEYNKWQQVIHCLALLDVICSLAEYASTFSGDICLPDIQGFSTKPFISIDNGKNPC
VMNIETFVPNDTYMGAKEKAPLLLLTGPNMGGKSTLMRQVSVICIMAQMGSFVPASQCSF
SMVDRVFTRLGACDDIVRGHSTFFVELSEASAILRHASKQSLLIIDELGRGTSTHDGNAI
ATAYLKRLTQTECRTLFSTHYHSLVDHFVNNAQVQLGHMACMVENEDDESEESVTLLYKL
SEGRCPKSFGFNAAKLAGLPARIVARAREISKQIETEDKCRNVFRKVFASDELRVDEVVA
MVRTLEV
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaaccagaaaccagcaccagcccaaaagaatactttgtttaaatattttaat
tcacctaaaacaccaacgactccaaaaagctcagaaacagcatcaccatctttagttaag
gactctagaccaagtcctgtaagtgttgcttctggctgcgggaccccttcaattcataaa
aataaaaaaacaaaactggaaattaatcccgatgacagtggtgaggagcttcagattacc
aagtctaccaaacgtcgccgcatcgctctcctagacagcgattctgagcctgagaatgaa
tctcccaacaaaagaaaatctcctaaagaaaaagatcctccagccaagcgacatagaatt
caacctcagtcatctgacagtgaatctgaagaggaaagtcctatttcttcaaagaaaaag
atacaggggtcagatgttgcagagaactcggaacacaagtcttttgtgggatcttttagt
tattcaataagggaggaaaagagtgaaattgaatttggcaacaatagtaaagctggaaag
gtgaaaactaaatctgcaggtgatgcaaatatagattcaggatggattcacaatacccta
gattttctaaaaccagagaaaataagggatgctgaaaagcggagaccttctgaaccagat
tatgattcacgaacacttcatgtacctcaaacctatttaaattctcttactcccgctatg
agacagtggtggatattgaaaagtcaacacatggattcagttttgttctttaaagtagga
aagttttatgaattgtatcatatggatgctgtaattggggtgcaacaactaggtttctct
tatatgaagggagattttgcccattctggtttcccagaaggtggttactctaaaatggca
accatgctcattgacaaagggtttagggtagctcgggttgagcaaactgaaacaccagat
atgatggcagagagatgtaagacaatgaaaaaaacaactaaatttgataaagtagtgtct
cgtgaaatatgccaagtaacaacaaaagcctcatgtgtgtacggggcacaaatgccggaa
gctcggtcggaaatgggaaattatttatgtgcaattacagttaaggtaaatcctgataat
acaagcagattaggcatatgttttactgagacttcaatcggcactttttatttgtcagag
tttgatgatgataaacactgctcaaaactgttaactttgtttgctgaatatcctccatat
ttgatattaaccgaacgaggagtaaattacggtcacttgaaatatttattgaacacccaa
ttaaaagatattaaacaagaggttcttgctgctaaaacccaattctatgaagccgcgata
acattggaaaatctattttctgcttgttattttaaaacaaagaatggaaaatttgagtgg
cccaagttgtttgaagaagtcgctgaagactgcaatcctaaaccggaatatgaactagcc
ctaaaatcattaggagcgattcactggtttttgaagcgctctttcttggacatccaatta
ttttcaatgggcttatttgaaaaatatgaaccagtagactctcaagctgtaccgttaaat
aaacatatagaacgtgattatatggtgttggattctactgctctccagagccttagttta
ctaggaggaccaggaaccttgcagaagacgctagatttttgcaaaactccatttgggaaa
aggttattgccacaatttatttgtcgtcccctctgcaacctagataaaattaaacttaga
cagggtgcagttaaagaactgtatgaaaatccacaaaaattgcagacttgtcaagaattt
ttgaaaaagttgccggatttagagcgacaagtggcaaaaattcatacctatgggaataaa
ttttgcgttacttctcacccggatggaagagcgattttatatgaaaccaaaacttactct
aagcgtaagatacttgatttattgaatactttaagaggctttgaggcttcacaggaaata
gatgctatatttaaagagtgtgagtcccgattattacgtaaactaacacaatttgagcct
aatggtatgaacattgatttgactgaaacgctaacatttttcaagcaagcgtttaaccat
gaggccgctgagaaagaggggaaaattattcctaaacgaggtgtcgagcatgacttcgat
gaagcagaggaccaaatagaagaaataaacgaacagctgaaacagtatttaaagcaacag
tcgactttctttggatgccaagtctcgtatttcggaacggataagaaaagatttcaatta
gaagtccctgaacatagagccagtaaagctgatagcaaatatcaactcgaaggccataaa
aaaggagccaaacctgcaaagcggttctctactccaagatcaagggaattgttgcaagat
atgcttaaagctgaagctgaaagaaataaaataattttagacttgaatagaaggatattt
gaaaaattcagtcttgagtataataagtggcaacaagtaatacattgcttagctttgttg
gatgtaatttgttccttagctgagtatgcctcaacgttttctggagatatttgcttacct
gatattcaaggcttctcaactaagccctttatttccattgataatggaaaaaatccctgt
gtcatgaatattgaaacgttcgtcccaaacgatacctacatgggtgcaaaagagaaggct
cctttattgcttttaactggcccgaatatgggcggtaaatctactctaatgcgtcaagta
tccgtcatttgtataatggcacagatgggaagttttgttcccgcttcccagtgttccttc
agtatggttgacagggtattcaccagactaggtgcctgcgatgatatagtcagaggtcat
tcaacattctttgtggagttgagcgaagcatctgcgattttacggcatgcctcgaagcag
tcattgctgattattgatgaacttggcagaggcacttcaactcatgatggaaacgccata
gccacagcttacctgaagcgacttacgcagacggaatgtagaacattgttttccacacat
tatcacagcttagtcgaccatttcgtcaataatgcgcaagtacagctaggtcacatggct
tgtatggtggaaaacgaagacgacgaatcggaggaatctgttactttgctatacaaatta
tccgaaggacgttgcccgaaatctttcggcttcaatgcggcaaaactagcaggactacca
gcaaggatcgtagccagagctcgagaaatctccaagcaaatcgaaactgaggataaatgt
agaaatgttttcagaaaggtattcgccagtgatgaacttcgagtggatgaggttgttgca
atggtcagaactttagaggtataa
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