Euwallacea similis: 136413798
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Entry
136413798 CDS
T10684
Symbol
RpII215
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
esim Euwallacea similis
Pathway
esim03020
RNA polymerase
esim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
esim00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
136413798 (RpII215)
09124 Replication and repair
03420 Nucleotide excision repair
136413798 (RpII215)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esim03021
]
136413798 (RpII215)
03400 DNA repair and recombination proteins [BR:
esim03400
]
136413798 (RpII215)
Enzymes [BR:
esim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
136413798 (RpII215)
Transcription machinery [BR:
esim03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
136413798 (RpII215)
DNA repair and recombination proteins [BR:
esim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
136413798 (RpII215)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
136413798
NCBI-ProteinID:
XP_066253602
LinkDB
All DBs
Position
15:complement(2871850..2883466)
Genome browser
AA seq
1898 aa
AA seq
DB search
MAFTGDSKAPLRTVKKVQFGILSPDEIRRMSVTEGGIRYPETMEAGRPKLGGLMDPRQGV
IDRQSRCQTCAGNMTDCPGHFGHIELAKPVFHIGFITKIIKIMRCVCFYCSKLLVSPTNP
KIREIIMKSKGQPRRRLAFVYDLCKGKNICEGGDEMDIKKDGDQADPNKKQSHGGCGRYQ
PSIRRSGLDLTAEWKHVNEDSQEKKIPLTAERVWEIFKHITDEECFILGMDPKYARPDWM
IATVLPVPPLPVRPAVVMNGSARNQDDLTHKLADIIKINAELEKNETSGAATHILVENVK
MLQFHVATLVDNDMPGLPRAMQKSGKPLKSIKARLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRIDQVGVPRSIAQNMTFPEIVTPFNFEKMLELVQRGHSQYPGAKYIIRDNGERID
LRYHPKSSDLHLQCGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHVAQSMETRAELENLHITPRQIITPQCNKPVMGIVQDTLCAVRKM
TKRDVFIEKEQMMNLLMFLPIWDGRMPRPAILKPKPLWTGKQLFSLIIPGNVNMIRTHST
HPDDEDDGPYKWISPGDTKVMVENGELVMGILCKKSLGASAGSLLHICFLELGHEVCGRF
YGNIQTVINNWLLLEGHSIGIGDTIADPMTYLEIQKAIKKAKEDVIEVIQKAHNMELEPT
PGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPFGFRKRSLPHFIKDDYGPESKGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGEMVEFQSLPT
IKLSTKSFEKKYRFDPSNERYLRKVFNEDIIKEIMSSGDVIAELEKEWEQLQKDREALRQ
IFPSGDSSVVLPCNLQRMIWNVQKIFHINKKSTTDLSPLRVIQGVRELLRKCIIVVGEDR
ISIQANENATLLFQCLVRSTLCAKLVSEQYRLTTEAFEWLLGEIETRFQQAQVNPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINVSKKPKAPSLTVFLTGAAA
RDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIPEDQDFVNVYYEMPDFDPTRIS
PWLLRIELDRKRMVDKKLTMEQIAEKINAGFGDDLNCIFNDDNADKLVLRIRIMNGDDGK
FGEGEEDVDKMDDDMFLRCIEANMLSDMTLQGIEAITKVYMHLPQNDSKKRIIITDTGEF
KAIAEWLLETDGTSMMRVLSERDVDAVRTASNDICEIFSVLGIEAVRKSVEKEMNAVLQF
YGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAAAHAEV
DPMRGVSENIIMGQLPRMGTGCFDLLLDAEKCKMGMPIPQAQGGEATSGMFFGAAATPSM
SPGGAMTPWTQGATPFIGSASAWSPHNLMGSGMTPGGPAFSPSAASDASGMSPGYGAWSP
TPHSPAMSTFGQSPGYCPSSPAFNPSSPSMTPTSPVYSPTSPGYAPTSPGYGPSSPGYSP
TSPHYSPTSPSYSPASPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPSSPSYSPTSPSYSPTSPSYAPSSPRYTPASPSTFSPSSPRYSPSSPQYSPNSPS
YSPTSPSYSPASPNYSPASPSYSPSSPQYSPASPNYSPTSPNYSPSSPQHTPGSSKYSPS
SPNYSPTSPQYSPQSTKYSPTSPTYTPTSPSYSPGSPS
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcactggggactccaaggcccctttaaggaccgtgaagaaagtgcagtttggt
atcctcagtcctgatgaaattaggcgaatgtcagtcacagaagggggcatccgctatcca
gaaaccatggaggcagggcgccccaaacttgggggtcttatggacccccgtcaaggggtt
atcgatcgccaatctaggtgtcaaacttgcgctggtaacatgaccgactgtccgggacat
ttcggacacatcgaactagctaaacccgtatttcacattggttttattaccaaaattatt
aaaattatgagatgtgtatgtttttattgcagtaaattgttagtcagtccgaccaatcct
aaaattcgcgaaataataatgaagtccaaaggacaacctcgccgccgtttggccttcgtg
tacgacttgtgtaagggtaaaaacatctgtgagggtggtgacgaaatggacatcaagaag
gacggtgaccaagcggatcccaacaagaaacaaagccacggcggttgcggtcggtatcag
ccgagtatccggcgcagtggattggatttgacagccgaatggaaacacgtcaacgaagat
tcacaggaaaaaaagatccctttgacagccgaaagggtctgggagattttcaagcacatt
accgacgaggaatgtttcattcttggaatggacccaaaatacgcccgcccggattggatg
atcgccacagtgttgccggttcccccccttccggttaggcccgcggtggttatgaacggc
tcggctagaaaccaggacgatttaactcataaattagccgatattataaaaattaatgcc
gagcttgaaaaaaatgaaacatctggcgctgccactcatattttagttgaaaatgttaag
atgttgcagttccatgtggcaacgctggtcgacaatgatatgcctggacttcccagggcc
atgcaaaagtccggtaaacctttaaagtcaatcaaagcccgtctcaagggtaaagaaggg
agaatcagaggtaaccttatgggtaaacgtgtggatttttctgctcgtactgtcatcacc
cccgatccaaatctccggatcgatcaagtaggggtccctaggagtattgcccaaaacatg
actttcccggaaatagtcactccctttaattttgaaaaaatgcttgaactggtccaaagg
ggccattctcaatatcccggtgcaaaatacatcatccgagataatggcgagaggattgac
ttgcgttatcaccctaagtcgtctgatttgcatctacaatgcggttacaaagtggaacga
cacattcgtgatggagacttagttatctttaatcgtcaaccaactttacataaaatgagt
atgatgggtcacagagttaaagttcttccttggtcaacttttcgaatgaatttgtcttgc
acttctccctataacgctgattttgatggggatgaaatgaacttgcacgtggctcagagc
atggagactagagctgaattagaaaatttacatatcacccctcgtcagattatcactccc
caatgtaacaaacctgtaatgggtattgttcaggacaccttatgtgctgtgcgcaaaatg
acaaagagggatgtgttcattgaaaaggagcagatgatgaatttgcttatgttccttccc
atttgggatgggcgcatgccccgaccagctattctaaagcctaaacctttatggactgga
aagcagcttttctcgttgatcatcccgggaaatgtcaatatgatcagaacccactcaact
catccagatgatgaagatgatggaccatacaaatggatttcccctggagatactaaagtt
atggtggaaaacggagaacttgtaatgggtattctttgcaagaagtctctaggagcttct
gcaggctcattgcttcatatttgcttcttggaattgggacacgaagtttgcggtcgcttc
tacggaaatatccagactgtaataaacaactggctgctgcttgaaggtcacagtatcggt
attggagataccattgctgatccgatgacttatttggaaattcaaaaggcgatcaaaaaa
gccaaagaagatgtaatagaagtcatccagaaagctcataatatggaactggagcccaca
cctggtaataccttacgtcagacctttgaaaatcaagtcaacaggattttaaatgatgct
cgtgataaaactggaggctctgctaagaagtctcttactgagtacaacaacttaaaggct
atggtggtttctggttccaaaggatccaatattaatatctctcaagttattgcttgtgtg
gggcagcagaacgttgaaggaaagcgtattcctttcgggtttaggaagaggagtttaccg
cacttcatcaaagatgattacggtcctgagtccaaaggtttcgtggagaattcatacctt
gctggtttgactccttcagagttttatttccacgctatgggaggtcgtgaaggtctcatt
gataccgctgtaaagaccgccgaaactggttacatccagcgtcgtctgataaaggctatg
gagtccgttatggtcaactatgatggaactgtccgaaactctgttggccaacttattcag
ttgcgttatggtgaggacgggttgtgtggggagatggtggaattccagtccttgcccacc
attaaattgagcaccaagtcgtttgagaagaaatatcgtttcgatccaagtaatgagaga
tatttaagaaaagttttcaatgaggacatcataaaggaaattatgagttctggagatgta
atcgctgaattggaaaaggaatgggagcagttgcaaaaggatagagaggccttgaggcaa
atctttcctagtggagactcgagcgttgtgttgccgtgcaatttacaaagaatgatctgg
aacgtacagaagattttccatattaacaagaaatccactaccgatttgtctccattgagg
gttattcaaggagtgcgagagcttttgcggaaatgtataattgtagttggggaggacaga
atatcaatccaggccaacgaaaatgctactcttctattccagtgtttggtgcgaagcacc
ttgtgtgcgaaactcgtttctgagcaatataggctcaccacagaagcctttgagtggttg
ctcggcgaaatcgagactcgtttccaacaagcccaagtgaacccaggtgagatggtgggc
gctttagcggcccagtcacttggtgagcctgccacccagatgactttgaacaccttccat
ttcgctggtgtatcatcgaaaaatgtaactctgggtgtgcctcgattaaaagaaattatc
aacgtttccaagaagcctaaagctccgtctttgaccgtatttttaaccggagctgcagcc
agagatgcagaaaaggccaaaaatgttttgtgtcgtcttgaacatacgaccttgaggaag
gtcacggctaatactgcaatttattatgatccagaccctcaaaacacggtaattcctgag
gatcaagatttcgttaatgtctactatgaaatgcctgatttcgatcccacgaggatctct
ccctggttattgcgtattgagttagatagaaagcgaatggtagataagaaacttaccatg
gaacagattgcagaaaagatcaatgcaggttttggtgatgatttgaactgcattttcaat
gatgataatgctgataaattggtattgcgtatccgtattatgaacggagatgacggcaag
tttggagaaggagaggaggatgttgataaaatggatgatgatatgttcttgcgctgcatc
gaagccaacatgttaagcgatatgactctacagggaatagaagcaatcaccaaagtatac
atgcacttaccgcagaatgattctaaaaagcggattattattactgacactggggaattt
aaggccatagctgagtggttgctggaaactgacggtaccagcatgatgagggtactttct
gagcgggacgtagatgctgtcagaactgcttctaatgacatctgtgaaattttctcggta
ctgggtatcgaagctgttcgaaaatctgtggaaaaagaaatgaatgccgttcttcagttc
tacggtctctatgtaaattaccgtcacttagctttgctttgtgacgttatgacagctaaa
ggtcacttgatggccattacccgtcatggtataaacagacaagacactggagccctcatg
agatgttccttcgaagaaactgtagacgtactaatggatgcggccgcccatgccgaggtg
gaccccatgagaggagtgtcagagaacataattatgggacagctgcctaggatgggcact
ggatgctttgatttgctcttagacgctgagaaatgtaaaatgggaatgcccattccgcaa
gcccaaggcggagaagcaacttcggggatgttctttggtgctgcggcgacgcccagtatg
agcccaggaggagcgatgactccgtggacacagggggctactccgtttattggaagtgct
agcgcatggtccccacataatctaatgggcagcggcatgacaccgggaggcccagcattc
tctccctcagcagcctcagatgcctcaggtatgtccccaggttacggtgcttggtcgcca
actcctcattctccggcaatgtccacctttggccagtcgcccggttattgcccgtctagt
ccggcatttaatccttcttcaccatctatgacgcctacctctccagtgtactctccaact
tctccggggtacgctccgactagtcctgggtacgggccgagtagcccaggctactccccc
acgagtcctcattactctcctacgtctccctcttattctccggcgagtcccaggtactcg
cctaccagtcccagttattcacccacaagccctagttactctccaacttctccttcgtat
agtcccacatccccaagttattctccgacgagtccgagttactcgccgacatctccttct
tacagtcctacctcacccagctattctccaacgagtccgagttattcgcctacttctccg
tcttatagtccaacttcgccgagctattctcctacttctccgtcttacagtccaacttct
cctagttattctccgacttcaccgtcatacagtccaacttctcccagctactctcctaca
tctccttcttacagtccttcttctcccagttattctccaacttccccaagttactctcca
acgtctcctagctatgctccttcttcccccagatacacgccagcctcaccttcaactttc
tctccttcatctccaaggtattctccttcctctccccagtactcgcctaattcccctagt
tattctcctacgagtccaagctactctccggcctcaccaaactattccccagcctccccc
agctattccccctcatctccccaatattctccagcttctccaaactactcgccgacgagt
ccaaactattctcctagcagccctcagcacactcccgggagttctaagtattctccttca
tctcccaattattcaccaacctcgcctcagtactctccgcagagtacgaaatattctccc
acttctcctacttatacacctaccagtcccagttattcgcctgggtcaccttcataa
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