Euwallacea similis: 136414149
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Entry
136414149 CDS
T10684
Name
(RefSeq) polyadenylation and cleavage factor homolog 11-like
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
esim Euwallacea similis
Pathway
esim03015
mRNA surveillance pathway
Brite
Transcription machinery [BR:
esim03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
136414149
Messenger RNA biogenesis [BR:
esim03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
136414149
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136414149
NCBI-ProteinID:
XP_066254101
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Position
16:3631269..3650293
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AA seq
1185 aa
AA seq
DB search
MTTPEVIKAEYMSSLADLTFNSKHLINVLTMLAEENLPNAKIIVQAIEEHLAKVAVDVKL
PILYLVDCIVKNVGQMYTSIFSQNIVSTFCTVFKVVDEKTRLEMFKLRQTWNDVFPQMKL
YAIDVQIHQIDPAWPVTAQPANNINHNPRFLISSTRTNQASNYQKAEPSAIPNPVPVKPA
LSTTSPPSADMETLLMQEQLIQKQKELLVLQRKTLELEVLQTQVKLQEQIKAGGRRPPVN
TNILLAPEVANQLIPKVINNKVRPSGIACRSYGQSKIKPVNPAPPSARPSRDPRLIRRQQ
QEKLQQTIQEAPVVTTTSSMHDQKVAVLESNKNLHNKSSVRDIPRDPRLSKRGNKKSKFL
SKSREPFSDQKSRNVDKLSGALPKQNPNSSSSLSSGDLDSPPKTKRLPEKHRKREKPREF
DSASSSKRGKVQNSNKKARKEDSVEAKNEIPGNFVKNVKNTNWNYVGSSLAGNTASVEDK
DLRLASTSSQNDNSIKVNSEPVPAKEKSLEPTPLHISPPIKKPMDVDLRPHHRLSPTLPK
KRTSPEVSEQPSKRSRSFDVLFGSEDTDLRQIAVQAEEARANGAVDRPATPPPPIISAEK
SIQNSVRRDFPASPITSDLDAVRAKLANVTNRDKVLSRPSNFDVSNVISQSLVTAPTTGD
YQVQLPSNLSSTTTPQVPAMSLLNVNELFQKLVASGVVKTQEKPQGHFQELVPASSLLNN
RASERASAKLQQKNGRSQKRSLSKILKRLTFNRPETLKIRQEALYNIMYSGMQCSSCGMR
FPLEASMWYSQHLDWHFRQNRRGKKNSRVANSRKWYYSLRDWKNYEELEDLEEREKNYFD
QQQQQAGVAEEADEEVEIPTVAADPKTTDERCYMCRDTFEQFFNEEKEEWHLRNAIRVED
KTYHPACYEDYQKSILNDTLDDSKNEGDYQNNLIPGLETILNDEDGNEEIVSLIDDEEIP
EDALSPAKEEEAPQDDGDDDDVILNEVAPVRIVVDDDDDDDEVPTIEHNEFVVIKQEKPA
LDDDGFMDVDEIITLKEIGQVKIKSEPVEDDFRAVDSAHSPDKTTDNEDLIKMTSCEKTP
VPVTSHLQLITSMDGNIELSAPTTARSTISGGNKIKINISKPLPVIIPKEISETGDSSKV
IVKASEIPIEELDILNYKPALQNVPLKKLPPVRKCTELTGLCSIM
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacccgaggtgattaaggctgaatacatgtccagtttagcagacttgactttc
aacagcaagcacctaatcaatgttctaaccatgctggcagaagaaaacttgcccaatgcc
aagattatagtacaggccattgaagagcatttggctaaggttgctgttgacgtcaaattg
ccaattttatacctagttgactgtatagtgaagaatgttgggcaaatgtataccagcatc
ttcagtcaaaacattgtatccacgttttgcacagtttttaaagtggtcgacgagaagact
cgcctggaaatgttcaaactacgtcaaacatggaacgacgtgttccctcaaatgaaactt
tatgcaattgacgtgcaaatccatcaaattgatccggcatggccggttactgcgcagccc
gcaaataacattaatcataatcctaggtttttaataagttctacacgtacaaatcaagcc
agtaactaccaaaaagcagaaccctcggcaattccaaacccagttcctgtgaaaccagct
ttgtcaactacatcacccccttctgctgatatggagacgttactaatgcaagagcaatta
attcagaaacagaaggagttattggttttacagaggaagactttggaacttgaagtgttg
caaacccaagtcaagttgcaagaacagataaaagctgggggccgacggcctccagttaac
actaatattcttttggcacctgaagtagccaatcagctgattcccaaagtgatcaataac
aaagttaggccttcgggcattgcatgtcgttcctatggtcaatcaaaaatcaaacccgta
aatccagccccaccttcagctcgtccaagcagagatcctaggttaatacgtcggcagcag
caagaaaagttgcaacaaacgattcaagaagcgccagttgtcactacaacttctagtatg
cacgatcaaaaagttgcagttcttgaaagtaataaaaatctacataataaatcgagtgta
agagatattcctagagaccctcgcttatcaaagagaggcaataaaaaatcaaaattctta
tccaaatcccgcgagccattttccgatcagaagtcgcgtaatgtcgataaactgtcgggc
gctctccccaaacaaaatcctaactctagtagtagcttatccagtggcgatttagattcg
cctccgaaaactaaacggttgccggaaaaacacagaaaacgtgaaaaaccacgcgaattc
gatagtgcctcttcgagcaaaaggggaaaggtgcaaaactcgaataagaaagccagaaag
gaagactctgtggaggctaagaatgaaatccccggtaattttgtgaagaatgtaaagaac
acgaattggaattatgtggggtccagtttggcgggaaacacggcctctgtcgaggacaaa
gatttgcgtttagcgtcgacgagcagtcagaatgataattccattaaagttaatagtgaa
ccagttccagccaaggaaaaatcccttgaaccaactccattgcatatctcccctcccata
aagaaaccaatggatgtagatctgaggccacatcatcgcctttctcccactttgcctaaa
aagcgaacctcacctgaggtttctgaacaaccatcaaagagaagcaggagttttgatgtt
ttatttggcagcgaagacactgatttgcgacaaattgccgttcaagctgaagaggctcgt
gcaaatggagccgttgatagacctgcaacacctcccccaccaattatctctgcagaaaaa
tcaattcaaaattctgttagacgagatttccctgcatcacctataacgagtgatttggat
gctgtcagggccaagttggccaatgtcaccaatagggataaagtattgagtagaccatct
aactttgatgtatcaaatgtcatctctcaatcgttggtaactgcgcccaccactggggat
tatcaagtccaactgccgtccaacttgtcttctacaacaacgccgcaagtacctgctatg
tctctgttaaatgtaaatgagcttttccagaaactcgttgcttcaggggttgttaaaact
caagaaaagcctcaaggacattttcaagaattggttcctgcctcttcacttttgaataac
agagcttcagaacgagcctctgcgaaacttcagcaaaaaaatggaagatctcaaaagcgt
agcttgtctaaaatattaaaacgtttgacttttaacagaccggaaactttaaaaatccgt
caagaggcgctttataatatcatgtattcgggcatgcagtgctcaagctgcggaatgaga
tttcctctcgaagcgagtatgtggtacagtcaacatttagactggcacttcaggcagaat
agacgtggcaagaaaaactctagagtagcaaatagcaggaaatggtactattcattgaga
gattggaagaattatgaagagcttgaagatctcgaggaacgggagaaaaattactttgac
caacaacagcaacaagccggagttgcagaagaggccgatgaagaagtggaaattcccaca
gttgcagccgatcctaaaacaaccgatgaacgttgttacatgtgtagagatacctttgag
cagtttttcaatgaagaaaaggaagaatggcatctacgcaacgccattagagtggaggat
aaaacttatcatccagcttgttatgaggattatcaaaagtcaattcttaatgacacattg
gatgacagcaagaatgagggagattaccagaataacttaattccaggactggaaaccatt
ctgaatgatgaagatggtaatgaggagattgtttcgttgattgatgatgaggagatcccg
gaagatgctcttagtcctgcaaaggaagaagaagctccacaagatgatggcgatgatgat
gacgttatcctgaacgaagtggcccccgtcagaatagttgtagacgatgatgatgatgat
gatgaagttcccacaatagagcacaatgagtttgtagtgattaaacaagagaagcctgct
ttagacgatgatggttttatggacgttgacgaaatcattacgctaaaagaaatcggacaa
gtgaagataaagagcgaacctgtcgaagatgatttccgggcggtagactcagcacactcc
ccagacaaaacaactgataatgaagatttgattaaaatgacgtcttgtgaaaagacccct
gttccagtgacatcacatctccagctgataacctcaatggatggaaacatagaattaagc
gcccctacaaccgcgcgctccacaataagtggaggaaataagattaaaataaacatttca
aagccattacctgtgataatcccaaaggaaattagtgagactggtgatagtagtaaagta
atagtgaaagctagtgaaatccccatagaagagcttgatattctgaactataagcctgcc
cttcaaaatgtgcccctgaaaaagctacctccagttcgaaaatgcactgagctgaccggg
ttgtgctctataatgtga
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