Euwallacea similis: 136414240
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Entry
136414240 CDS
T10684
Symbol
roq
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
esim Euwallacea similis
Brite
KEGG Orthology (KO) [BR:
esim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esim03000
]
136414240 (roq)
04121 Ubiquitin system [BR:
esim04121
]
136414240 (roq)
Transcription factors [BR:
esim03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
136414240 (roq)
Ubiquitin system [BR:
esim04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136414240 (roq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-RING_UBOX
zf-RING_10
zf-C3HC4_4
PaaA_PaaC
Vesi_VP2
GED
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
136414240
NCBI-ProteinID:
XP_066254234
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Position
17:complement(1486714..1561059)
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AA seq
907 aa
AA seq
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MDILFKMPIQAPQWTEYLSCQVCCNLFDDKLRSPISLGCGHTICKGCLCNLHRKQCPFDQ
TLINVDIEHLPVNTALLQLVGPTVKTEIKEEILDSTIVPRNCHNDYLKCKQYVEELALYL
KPHSNGSGSILSRPMQRKLVTLINCQLVEDEGRTRAMRAARSLGERTVTELILQHQNPQQ
LSANLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFPQAS
KTSIGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYDALRREHDAQIVQIATEAGLRI
APDQWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQELVIALQRTGDPGKLSVLRNPLE
LLAAIDPSPESSSPDWKECTDCLEAVKQVVAGLVEFIQQHGSRRVQDTSHSQHAKYKISM
CRDLTLRGSCPRGTNCTFAHSNEELEKYRAKNRKNNNRSKEHRIECQSPIEKVFPQPEEY
YSIPNNTVSPIPMQPIPITIPRMSYDLPFNPNYPASHAQFAQPMYSQVPTSYAAQEIMPT
TAHNVVLSNGTQAVYPVSQQQEFQSVTVNSVPGVDNGRRGWDHMVMKHQAYPPSKPPRNQ
MKTLAELQQLRKEVLVQLEKVVGKNAATEISNNASTLARQESQHDLDSPSSPYNFLIGQI
NSGPTFVRSDSILAADDDYVPYEGPAISKFGPISRMPKDGNGLSQSVQMSAPYREGNLSS
NLARRPLSSGSPVASWFINNNNHYHQNAIPSGHTIVVPPSPGVSEGYVTYGMFKGSPQYI
LHSRLQDTSTKELLAESQRVQQQLRNLEKQLNNLKLASQGVTSLSESERLAQQLHVIEQG
IQERQKEACLNKIVHSLTQGNRSYNGNLPAKSTDDAMFEQDIANDMRELELRLQEELEEW
SEEDSPK
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggatattctctttaagatgccaatacaggcgccgcagtggacagaatatttatcttgc
caagtgtgttgcaatctcttcgatgacaagctacgcagccccataagcttaggatgtgga
cacacaatatgcaagggttgcttgtgcaatttgcaccgcaaacaatgtcctttcgaccag
acccttatcaatgtagacatagaacacttaccggtaaataccgccttgctgcaactggtt
gggccaactgtgaaaacagagatcaaagaagaaatccttgacagcacaattgtacccaga
aactgccataatgactatttaaaatgtaaacaatatgtagaagagcttgccttgtatttg
aagccccattctaatggaagtggtagtatattgtcaagaccaatgcaacgtaaactagtc
actctgattaactgtcagctggtagaggatgaaggaaggactcgagccatgagagctgct
aggtctcttggcgaacgaacagttacagagttaatattgcaacatcaaaatcctcaacaa
ttgtctgcaaatttgtgggcagctgtacgtgctagaggatgtcaatttttggggccagca
atgcaggaggaagtacttaaacttgtgttattggcgcttgaagatggatctgcattatct
aggaaggttctagtcatgtttgttgttcagagactggagccccattttcctcaagcttcg
aaaaccagtataggccacgttgtacagttgctgtacagagcttcttgttttaaggtctct
aaacgcgagggtgattcttcattaatgcaactcaaggaggagttcagaacttacgatgcg
ttacgtcgcgaacacgacgcgcagatagttcaaattgccaccgaggctggcttaagaata
gcccccgaccaatggtcggctctgctttatggagacacagctcataaatcgcatatgcag
agcattatagacaagttacaaacaccacagtctttcgcacagagcgtacaggaactagtg
attgctttgcaaagaactggcgatcctgggaaattgtcagttttgaggaatccattggag
cttttggctgccatcgatcccagtccagaatcttcgtctccggattggaaagaatgcact
gattgtctggaagcagtgaaacaagtcgtggctggattggtggaatttatccagcagcac
ggaagtcgaagagtgcaagatacgtctcattctcaacatgcgaagtataaaatcagcatg
tgccgagatttgacgctcagaggtagttgtcctagaggaaccaactgtacttttgcccac
tcgaatgaagaattggaaaagtatcgagccaaaaaccgtaaaaacaacaaccgaagcaaa
gaacatcgcatcgagtgccaatcgcccatcgaaaaggttttcccacaacccgaagaatat
tactcaatacccaacaatacagtcagcccaatccccatgcaacctatacccataaccatt
ccaaggatgagttacgacctgccctttaatccaaattatccagcttctcatgcgcaattc
gcccaacccatgtactctcaagtgccaacatcttacgctgcgcaagaaatcatgccgacg
actgcgcacaatgtggttttatccaatggtacacaggcggtgtatccagtgtctcaacaa
caggagtttcagagtgttacagtgaattctgtaccaggagttgataacggaaggagaggt
tgggatcatatggtcatgaaacatcaggcctatcctccttccaagccgccacgaaaccaa
atgaaaactttagctgaattacaacagctgcgaaaagaggttttggttcaattggagaaa
gtggtgggtaaaaatgctgctacggagatctcgaacaacgcttcaactctggcgaggcaa
gagtcccagcacgatttggacagtccatcttcaccgtataatttcttgatcggacaaatt
aactcaggaccaacatttgtacgatcagattcaatcttagctgcagacgacgactacgtc
ccttatgaaggacccgccattagtaaatttggtcccatatctagaatgcccaaagatggc
aacggtcttagtcagtccgttcagatgtctgctccttacagagaaggcaatttatcttca
aacctggcgaggaggccattatcatccgggagtccagtggcatcttggtttattaacaac
aacaaccactatcatcaaaatgcaatcccatcaggccacaccattgtggtacctcctagt
ccgggtgtgagtgaaggttatgttacttacggtatgtttaaagggtcacctcagtatatt
ctgcactcacgccttcaagacacatcgactaaggagcttcttgccgagtcacaacgagtc
cagcaacagctgcgaaatctggaaaagcagttgaataacttaaaactggcctctcaagga
gttacgtccttaagcgagagcgaacggcttgcgcagcagcttcatgtgattgagcagggt
attcaggaaagacagaaggaggcatgtttgaacaaaatagtccactctttgactcaaggc
aaccgaagttacaacggaaacctgccggctaaatcgacagacgatgccatgttcgagcag
gatatcgccaacgacatgcgcgaactagagttgcggcttcaagaggagttggaggagtgg
agtgaagaggactctcctaagtaa
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