KEGG   Euwallacea similis: 136415378
Entry
136415378         CDS       T10684                                 
Symbol
Rrp42
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
esim  Euwallacea similis
Pathway
esim03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:esim00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    136415378 (Rrp42)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:esim03019]
    136415378 (Rrp42)
Messenger RNA biogenesis [BR:esim03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     136415378 (Rrp42)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     136415378 (Rrp42)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 136415378
NCBI-ProteinID: XP_066256031
LinkDB
Position
20:complement(1550444..1552327)
AA seq 283 aa
MSLSEAEKTFILHGVAENFRVDGRDREGYRPMEVETDIVQHAFGSARLRLANTDVLVAVK
IEVDTPLPEKPFEGKIEFFVDCSANATPDFEGRGGEDLAIELSNTLSSAYGSYKTLNLRK
LCILKGKKCWKLLVDVLILECGGNLFDAVSLAVKAALYNTQVPKIRAVNIDGDNVEIEVS
DNVFDCESLDIIHAPVLVTVCKIGEHCIVDPSLGEEQCTVGSIVVSVSGDSFSAITSIGT
GSLQEETLFECLDLGQKVGVRLNEALMETLSQIPAHQDIGFLK
NT seq 852 nt   +upstreamnt  +downstreamnt
atgtccctttctgaagccgaaaaaaccttcattttacacggagtagctgaaaacttccgc
gtagacggacgagaccgtgagggctacaggcccatggaagtagaaactgatatagtccaa
catgcctttggctctgctcgattacgattagcaaacactgacgttttggtggctgttaaa
attgaagtcgatacaccacttcctgaaaaaccttttgaggggaaaattgaattctttgtt
gattgctctgcaaatgcaactcctgatttcgaaggcagaggtggggaagacttagctatt
gaactctccaatactctctcatcagcatatggttcatataagactttaaatttacgaaaa
ctgtgtattttaaaggggaagaagtgttggaagctgttagttgacgtattgattctagaa
tgtgggggtaatttatttgatgcagtatcattagctgtaaaagcagccttatacaacact
caagtgcctaaaattcgagccgtcaatatcgatggggataacgttgaaattgaagtgtct
gataacgtttttgattgcgaaagcttggatataatacacgctccagtattggttacagta
tgtaaaataggagagcactgtatagtggacccaagcttaggtgaagaacaatgtacagtt
ggttcaatagtggtgtctgtgtcaggggacagtttcagcgcaattacctcaattgggaca
ggttctttgcaggaagagactttatttgaatgcttagatttgggtcagaaagtgggtgtt
aggttgaatgaggctctaatggagactctcagccaaattcctgcccatcaagacattgga
tttctgaaataa

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