Euwallacea similis: 136416138
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Entry
136416138 CDS
T10684
Symbol
Tfb1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
esim Euwallacea similis
Pathway
esim03022
Basal transcription factors
esim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
esim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136416138 (Tfb1)
09124 Replication and repair
03420 Nucleotide excision repair
136416138 (Tfb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esim03021
]
136416138 (Tfb1)
03400 DNA repair and recombination proteins [BR:
esim03400
]
136416138 (Tfb1)
Transcription machinery [BR:
esim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
136416138 (Tfb1)
DNA repair and recombination proteins [BR:
esim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
136416138 (Tfb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Eno-Rase_FAD_bd
NUP120_helical_2
Motif
Other DBs
NCBI-GeneID:
136416138
NCBI-ProteinID:
XP_066257280
LinkDB
All DBs
Position
22:1255240..1257592
Genome browser
AA seq
547 aa
AA seq
DB search
MSTSSEDVLVQVSSVRYKKGDGTLFLMDQRLIWMVENRDTVAVSHAYADIKSQKISPEGK
AKVQLQVVLHNGVSSTFHFSNKNGLPAQLADRDRVKDMLQTLLPKFKRKVDKELEEKNKM
LSSNPTLLQLYKDLVMTEVVSSEEFWAQHAQQYTHKRKQTNQEIGVSGAFLADIKPQTDG
CNGLKYNITPDIIECIFKTYPAVKKKYIENVPNKLSEAQFWTKFFQSHYFHRDRKYAENK
DLFTECGKIDDQEMKKDIQAGVKDPLVNLTEFEDKTLGEGYGTGTEKPLSTVGTVSQAMI
KRFNQHSIMVMKASKNKVNENTGDIPQTSADSFKKDTPEEPVDKKRKILEKITYDDLEDN
ENATNGNVHLNLSKVERYLHGPMPDSVTEYISPSEASQMMRNVIVETRQWQARPHMPNYG
LVPPSAATQALGDLSPGGALMRGFQEQSLAQLVPPHIEKEVRNLYLALCELLGHFWKCFP
PTSANSEQKLVKMNEALQRFQTAKLKPFEDKLIRELTPLSQHLTKHLNQLLNAAYQKYAN
WQKVKSR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtccacctccagcgaggatgtgctggttcaagtctcaagtgtccggtacaaaaagggc
gatgggacgcttttcctcatggatcagcgattaatttggatggtagagaacagggacact
gtggcagtttctcatgcttatgccgacatcaaatcccaaaaaatctcccctgagggcaaa
gctaaagtgcaacttcaagttgttttgcacaatggtgtgtcttccactttccatttttct
aacaaaaatggcctgccagcacaactagctgatagagatcgcgttaaagacatgctgcag
actctacttcccaaatttaagcgaaaagtagacaaggagctggaagagaagaacaagatg
ttgtcaagcaatcctactttgttgcagctttacaaggatttagtgatgacagaggtagtt
tcgtctgaggagttttgggcacaacatgcacagcagtatacccataaaagaaaacaaaca
aaccaggagattggggtatccggggccttcttggcagatattaaaccccaaacagatggc
tgtaatggcctaaaatacaacattactccagatataattgaatgcatcttcaagacttat
ccagcagtgaagaaaaagtacattgaaaatgtgccaaataaactaagcgaagcccaattt
tggaccaaatttttccagtctcattacttccatcgtgatagaaaatatgcagaaaataaa
gacctctttactgaatgtggaaagattgatgatcaggaaatgaagaaagatattcaggca
ggagttaaagatcctctggtaaatcttacagaatttgaggataaaactttaggtgaggga
tatggaacaggtacagaaaagccacttagtactgttggtactgtcagtcaggccatgatc
aagagattcaatcagcattccatcatggtaatgaaagcatcgaagaacaaagtaaatgaa
aatactggagatattcctcaaacttcagcagacagtttcaaaaaagatacgcctgaagag
cctgtagacaaaaaaagaaagatactagaaaaaattacatacgacgatttagaggacaac
gagaatgccacaaatggaaacgttcatttaaatttgtctaaggtggagcgttacttgcat
ggtcctatgcccgactcagtcaccgagtatataagccctagcgaagcttcgcaaatgatg
cgaaacgtaatcgttgagaccaggcaatggcaggcccgtcctcacatgcccaactacggc
ctagtacccccttcggcagccactcaagccttgggggacttatcaccaggtggagctcta
atgaggggcttccaggagcaatctttggctcaactagtgccgccgcacatcgaaaaagaa
gtccgtaatttgtacttggctctgtgtgaactcttggggcatttttggaagtgttttcct
cctacttccgctaatagtgagcagaagctggtaaaaatgaacgaggctctacagcgattt
cagacggccaaacttaaacccttcgaggataaactgatccgcgagcttactcctctatcg
caacatctcaccaagcatttaaaccaactcctaaacgccgcttaccagaaatatgccaac
tggcaaaaagtgaagtctagatag
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