Euwallacea similis: 136416581
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Entry
136416581 CDS
T10684
Symbol
Patr-1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
esim Euwallacea similis
Pathway
esim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136416581 (Patr-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esim03019
]
136416581 (Patr-1)
Messenger RNA biogenesis [BR:
esim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136416581 (Patr-1)
mRNA degradation factors
5'-3' decay
Decapping complex
136416581 (Patr-1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
136416581
NCBI-ProteinID:
XP_066257930
LinkDB
All DBs
Position
23:2662303..2671587
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AA seq
784 aa
AA seq
DB search
MANSFFDFDTSLKGDLDPKNGEPLLPEDDDGFENEEEYDALNDETFGACVNDDDWEKQHE
QFAINESSKHSDSLDVSLSRLGLEDLSDDDDDDDESPTELTFPKDSSVWTYNPPQKNGDV
FNNSVLSSLQKASKSFIETQTAQNPVLSYLNSHAKGSSGNSVPPMNFQLQPGKICTVEEL
EKNLIKSSQQQKLPVDLKGIDLHSQQQNHVPLNQINLQHAQGQQRPLLSMPPHGVHPYHP
MLQHPGARLPPPGLPPLNLPPPNMRHLPPMNHPMMHPGFRMMPPHHHMMHPNGPPGYPYP
LPVNHPFNYPPPPPHGIVGQQIMGPSRPHPMQQQQYSPQKQQQQQYQLNLGQRVRHDSGS
SRYSNRDQHEQLNRDEYAGLMTPKDKQWLLNIQMIQLNTGTPYFDDYYYTIYKERKSKSN
KENIHNNDRNNKFQRQRRNSERQENNLTPRVYTPLQFENSLGKLQCGSVTAPRKIIDMDV
VQPDKEQELPPPSRDSKKTKQYLLELEALYSLLLKAEDINNPLYLSNMEKLREMKQKQRL
RELEQATTPEQKQEVLRLFKLESEPVVENELDYINRILSGFVQEDKFSSFLNIRKGKMLL
LRLLPYLSLENFGTQLLDIWSKVLLSLPLTGRRDTAGDTLLPKLYPHFKKFVQTCTMSDI
IDMITGLVEEVKQENNRSTPLSHAGKAPLYFVVLNRFGVSAMVCLFLRAETIFSTVDPTE
KQHNDWTNFLISWAKHAESVSKVPVPLEGISSEIFRKHADRFKLLTVDKKATLEKYFVDV
HHIH
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcattttttgatttcgatacttcgctgaaaggagatttggaccccaagaat
ggtgaaccacttttaccggaagacgatgatggttttgaaaatgaagaagagtatgatgcc
ttaaatgacgagacttttggtgcttgtgtaaatgatgatgattgggagaagcaacatgag
cagtttgcgatcaatgagagttcaaagcacagtgattctctggatgtgtctctctctcga
ttgggtttagaagacttatcagatgatgatgatgatgatgatgagagtcccacagaatta
acatttcccaaagattcatctgtttggacctacaatcctccccaaaaaaatggggatgtt
ttcaataattctgtgctgtcatcgttgcaaaaggcttcaaaatcctttattgagacacaa
acggcccaaaatcctgttctttcctacttaaacagccatgcaaaaggtagttctggcaac
agtgtgcccccaatgaattttcaactgcaaccgggtaaaatttgtactgtggaggaattg
gaaaagaatttgatcaaaagctcacaacaacagaaattgcctgtagatttgaaaggaata
gatttacacagtcagcaacaaaatcatgttccactgaatcagattaatctacaacatgct
cagggacagcagaggcctttgttgtctatgcctcctcatggcgttcatccttaccatccc
atgttacagcatcctggtgctagattgccacctccgggtttaccacctttaaatctaccg
cctcctaatatgcggcatttgccccctatgaatcatccaatgatgcaccctggatttaga
atgatgcctccccatcatcatatgatgcatcctaacggtcctccggggtatccctatcca
ctaccggtaaatcacccgtttaattatccccctccgcctccccatgggatcgtgggacag
caaataatgggaccgtctagacctcatcctatgcaacagcagcaatattcgcctcaaaag
cagcaacaacaacaatatcagctcaatctcggccagagagtgcgacatgatagcggaagc
agtaggtatagcaatagagaccaacacgagcaactaaacagagacgaatacgcaggtctg
atgacgcccaaagacaagcaatggcttctgaacattcagatgattcagctaaatactgga
actccgtatttcgacgattattattatactatctacaaggagcggaaatcgaaaagtaac
aaagaaaatatccacaacaatgacaggaataataaattccaaaggcagaggaggaatagt
gagagacaagaaaacaatttaactcccagggtgtatacaccgttgcagtttgagaattct
ttagggaaattacagtgcggctcagtgactgctccgaggaagataattgatatggacgta
gttcagcccgataaagaacaagaattgccccctccttcaagagactctaagaagacaaaa
cagtatcttttggaacttgaagctttgtactcactcttgttgaaagctgaagatatcaac
aatcctctgtatctaagtaacatggagaagttgagggaaatgaagcagaaacaaaggtta
agagagttggaacaagctacaactccagaacaaaaacaggaagttcttagactgtttaag
ttggaaagcgagccagtggtggaaaacgaactggactacattaatagaattttaagtgga
tttgttcaagaggacaagttctctagcttccttaatataaggaaaggaaagatgttgtta
ttaaggctgttaccctatttgtctttggaaaacttcgggacacaacttttagatatatgg
agtaaggtattgttgagtttgcctttaactggtcgcagggatacggctggggatacgctg
ttgcccaagctctatccgcattttaaaaaattcgttcaaacgtgcacaatgtcagacatt
atagacatgataaccggtttagttgaagaagtgaaacaggaaaacaacaggagcacgcct
ctgagccacgccgggaaggctccgctttacttcgtcgtgcttaatagatttggagtgtca
gccatggtgtgtctgttccttagagccgaaaccatattctccaccgtagatcccacagaa
aagcagcacaatgactggacaaatttcctcatatcttgggcaaaacatgcggaaagtgtc
agcaaggtaccagtacccttagaggggatctcttcggagattttcaggaaacacgccgat
aggtttaagctactgactgtggataagaaggccacgctagaaaaatatttcgtagacgta
catcatattcattaa
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