Euwallacea similis: 136418124
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Entry
136418124 CDS
T10684
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
esim Euwallacea similis
Brite
KEGG Orthology (KO) [BR:
esim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esim03041
]
136418124
Enzymes [BR:
esim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136418124
Spliceosome [BR:
esim03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
136418124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Helicase_C
HA2_C
OB_NTP_bind
DEAD
R3H
Ank_2
HA2_N
Ank_5
Ank
nSTAND3
Paxillin
Ank_3
AAA_19
Motif
Other DBs
NCBI-GeneID:
136418124
NCBI-ProteinID:
XP_066260180
LinkDB
All DBs
Position
32:1856293..1869316
Genome browser
AA seq
1483 aa
AA seq
DB search
MSANFERHQRGHRQGFDSPSNQRLNASSARPRRENVRFGVNKGKHSKNNLVIDEHIQEAT
PEHLRIEIDKIIDGFLADPDQSEYIFPADYNNLQRKYVHYKAQIMNLISRSHGKEPNRQL
HLSKKPKLLSSQSFQVPVCDEIYAQLQIFDKQFRGHAPQPHRNWSIKRVETNYDLIQESK
PIIPRPPTDRPAIRTIRENLPIFEKRRNVLDCIESNRVIILSSETGSGKTTQVPQYIMEE
ANLRKQPCKIICTQPRRISTVAAAERVSYERDEVVGGSVGYHIRLESNYSFNTNLLFCTV
GIFLRNIMDGSDCLGNITHVIVDEIHERDKLSDFLLICLKQNLSRYPHLKIILMSATMDT
TKFQEYFQSSAVLSIPGRLFPIETFFIEEILGMTQFVTPQMRAAMKKLEERNSQQQTDVT
GAGVVEKAAPLSDMDQAHFDDVLETYMNLSDNYNYTEDFTEATADLMHVFLSEHVSVDQQ
HSGTGWTALAVACHLGDLQFVNILCNLGASLDIADQMGQTPYDYAKIAKRNEILLLLDDV
KERRKLNKNSPKSNDPEHLRQLYDMTTPDEFIDYDLIVELIKYIDSRSNAGSILIFLPGY
DEIMQCNDHIIDSNLNSSKYRVFFLHSSMNMKDQWDVFKPLANQRKLILSTNIAETSITV
EDVVFVIDVGKAKEKVYDSYNKLSSLQSQWISRACAKQRQGRAGRVMPGFCFRMYSKQRF
SYMSEERIPEILRVSLEELCLHAKIIAPNHMNIYNFLALALDPPSANSVGVAIEHLQGLG
ALDKEEELTRLGEYLTHLPLEPRLGKMLLLGCIFKCLEPMLTICASMAHKDPFQLPPQAN
LRTAAAAKRRELLNGVASDHAIYLLVFQKWQDEMTKGRSRQFCHEYFISESAMNSVLDTR
RQLLSQLRAIGFVNCSRSLDDLNHNSNSWGLVKGIMCAAYFPNVAYPVQRGVALATRNEK
KVAIHNTSVCCAKRYDHWCFYDEMVKNRSNFLIRGVTVCSPLTVAVMCGVNSIYPSSHSV
SLDDWVEFYFGDTLIIKLRQALHSLVDSVVLNPRHSIESNGVILNTLRSVLDKEEKNCGF
VQPSNVGQRPKFLFRTVNSESTNAPITRNGMRSSASENQNGKIYRREDPIESGKKSKHYV
PPNKRKNFDNSKAFEGRGPNTSDLARSLQELNVNDSPSPVNSLLRGLAVGAEGPGSQFNN
SNRFNQTQNQKNKPQQRFHGFNGHNANSGIGQFNSEFSAPGRNGSGKSGRGNRRGKRQGA
VPNVFNETRFLPRSMQLPTPRKIVKGLDKRFQYKSVLPMAMLNSHFGLSGLPPPISVLPE
KYQSQLSPYPLSLSPNALVPSIEKKMEYPDDPIFVLIKAREKKNIDIAQKTYKWVFSPQT
EKKVIGFQGKGKKIYLVFFVKEIQMFMGIAQYKSMNFGKKYFKPTATISWIFISTLNKNN
TRHLLNPYNSGKPIYEGCDGQIIKTDIGEELLRIYSESTRGKL
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaattttgaaagacaccaaaggggccataggcagggcttcgacagcccctcg
aaccagcgtttaaatgctagttcagctcggcctcgaagggagaatgtaaggtttggagtc
aataaaggcaaacacagcaaaaacaacttagttatagacgagcatatccaagaagctact
ccagaacatctcagaattgaaatagataaaattattgatggctttctagccgatccagat
cagagtgaatacatatttcctgcagactacaataatttgcagaggaagtacgttcattat
aaggctcaaatcatgaatttgatatctcgatcacatggtaaagaacccaaccgtcaactc
cacttatcaaagaagccgaaattgttgtctagtcagtctttccaagtgccggtgtgtgat
gaaatttacgcacaattgcagatttttgataaacaatttcgcgggcatgcgccgcaacct
catcgtaattggtcgattaaacgcgtcgaaaccaactatgatctcatacaagagtcaaag
ccaataattccaaggccgcctactgaccgtcccgcaattcggactattagggaaaacttg
ccaattttcgaaaaaaggcgcaatgttttggattgcatagaatctaacagggtgataatc
ttatcttcggagaccggttctggtaaaacaacccaggtgccacaatacatcatggaggag
gctaatctgcggaagcagccctgcaaaattatttgcacccaaccacgtagaatttccaca
gttgctgctgctgagcgtgtttcgtacgagagggacgaagtggtagggggcagcgttgga
taccacattcgacttgaatcaaattatagtttcaacacgaatttgctgttttgtaccgtg
ggaatctttttgcggaatatcatggacggaagcgactgtttggggaatatcacgcacgtg
atcgtagacgaaatccacgagcgcgataaactcagcgatttccttctaatctgtttgaaa
caaaacttgtcccgataccctcatctaaagatcattctaatgtctgctaccatggacact
accaaattccaagagtatttccaatccagcgcagttctttcgattcccggacgtcttttt
ccaattgagacgttctttatcgaggagattttaggaatgacacagtttgttactcctcaa
atgagggcggcaatgaagaaattagaggagcggaattcgcagcagcagactgacgtcaca
ggcgccggcgtcgtcgagaaggcggcgcctttgtcggatatggatcaggctcactttgac
gatgttttggaaacttatatgaacttaagtgacaattacaattacaccgaagattttact
gaagcgacagcagatctcatgcacgtattcttgtccgaacacgtgtcggtcgatcaacag
cattccggaacgggatggacagcattggccgttgcctgccacttaggcgacctacaattt
gtcaacattttgtgcaatttaggtgccagtcttgatatagctgatcaaatgggtcaaacc
ccgtacgattatgccaagattgcgaagagaaacgaaattttattgctcttagatgatgtg
aaagagcgtcgaaagttgaataaaaattctccgaaaagtaacgatccagaacatttgaga
caactctacgatatgaccacgcctgacgaattcatcgactatgatctcatcgtggagctg
attaagtacatcgattcgcgttctaatgcaggatcaatattgatttttctaccaggttac
gatgaaataatgcagtgcaacgaccacattatcgattcgaacttgaactcttcgaaatat
cgtgtatttttccttcacagcagcatgaatatgaaggaccagtgggacgttttcaagcct
ttggctaaccagaggaaactgattttaagtacaaatatcgcagaaactagtattacagtc
gaagatgttgtcttcgtgatagatgtcggcaaggccaaagagaaagtatatgattcgtac
aataagttgtcgtctctgcaatcccaatggatatcacgggcctgcgctaagcaacgtcaa
ggcagggctgggagagtgatgccaggtttctgttttcgcatgtattcaaaacaacgattc
agttacatgtcggaggagcgaattcctgaaattttgcgagtctctttggaagagttgtgt
cttcacgccaaaattatcgccccaaatcacatgaacatctacaatttcttagctctggcc
ctcgatccaccttcggcgaactccgtgggggtcgctatcgaacatttgcaaggattggga
gcattggacaaggaagaggaacttacgaggttgggtgaatatttgacgcatctccctttg
gagccgagattaggaaaaatgctactcttggggtgcatttttaagtgcctcgaaccgatg
ttgacgatatgcgcttccatggctcacaaagatccattccagctcccgcctcaagccaat
ctgagaacagccgctgcagcaaaaagacgggagctactgaatggagtagccagtgatcac
gcaatttatttgctggtctttcagaagtggcaggacgaaatgacgaaaggtcgatctaga
caattttgccacgaatattttatatcagagtcggcgatgaactctgtattggacactaga
aggcagcttttatctcaacttcgggcgattggtttcgttaattgttcccgctctctcgat
gatttaaaccacaacagcaactcgtggggtttggtgaaaggtattatgtgcgccgcctat
ttccctaatgttgcttacccggttcaaagaggcgtggcgttggccacaagaaatgagaaa
aaggtagccatacataacacaagcgtctgttgcgcgaagcgctacgatcactggtgtttc
tatgacgaaatggtgaagaacaggagcaattttttgattcgtggggttacagtttgctcc
ccattaacggttgctgttatgtgcggagtgaattcgatttatccctcatcccattctgtc
agtttggacgattgggtggaattttattttggtgatactttgatcattaaactgagacag
gctctgcattcattggtcgatagcgtcgttttgaatccgaggcattcgattgagtccaat
ggggttattctcaatactttacgctcggtactggacaaggaggagaagaactgtggcttt
gtgcagccgtccaacgtgggccagaggccaaaattcctctttaggacggtgaacagtgaa
agtacgaatgctcccattacgagaaacggcatgagatcaagtgcgtcagagaatcagaat
ggaaaaatctatcgtcgggaagatccgatagagagcggcaagaagtccaaacactacgtt
ccgcctaacaagagaaagaattttgacaattctaaagctttcgaaggtcggggtcccaac
accagcgatttagcccgaagtcttcaggagctcaacgttaacgattcgcccagtccagtc
aattctcttttgagggggttagcagtaggtgcagaaggtccaggatcacagttcaacaat
tctaaccgcttcaatcaaacacagaaccaaaaaaataaaccccagcagcggttccatggg
tttaacgggcataatgccaattccggaattgggcaattcaattcggagttttccgcaccc
gggcggaacggtagcggtaagtctggtcgcgggaatcggcgtggtaaacgacaaggagcg
gttcctaatgtgttcaatgaaacacgtttcctacccagatccatgcaattaccaactccc
cggaaaattgtaaaaggactggacaagcgcttccaatacaagtcagtgctgcccatggca
atgctaaattcccattttggtctttcaggtctaccaccgccaatctcggttttaccagaa
aaatatcaatcacaacttagtccttatccactttctttgtctccgaacgctttagtccca
tcgatagagaaaaagatggaatatccagatgatccgatattcgtgctgatcaaagcccgt
gaaaaaaagaacattgatattgcccagaagacctataagtgggtgttttcccctcagacc
gagaagaaagttattggtttccagggtaaaggaaagaagatttatctggtgtttttcgtc
aaggaaatccagatgtttatgggcattgcccagtacaaaagtatgaacttcggcaagaaa
tatttcaagcctactgcgactatttcgtggattttcatctccactttgaataaaaacaat
acaaggcatttacttaatccctacaactcgggcaaaccgatctacgagggctgtgacggg
cagataatcaagaccgacatcggcgaggaacttttgcgcatttattctgaatcgactcgc
ggcaaattgtaa
DBGET
integrated database retrieval system
