Euwallacea similis: 136418404
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Entry
136418404 CDS
T10684
Symbol
fand
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
esim Euwallacea similis
Pathway
esim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136418404 (fand)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esim03019
]
136418404 (fand)
03041 Spliceosome [BR:
esim03041
]
136418404 (fand)
Messenger RNA biogenesis [BR:
esim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136418404 (fand)
Spliceosome [BR:
esim03041
]
Complex B
Other components
Prp19-related factors
136418404 (fand)
Complex C
136418404 (fand)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_8
Mad3_BUB1_I
TPR_2
TPR_12
TPR_15
NRDE-2
TPR_10
PPR
RPN7
TPR_7
Mad3_BUB1_I_2
Tcf25
TPR_1
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
136418404
NCBI-ProteinID:
XP_066260554
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All DBs
Position
34:275149..278844
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AA seq
850 aa
AA seq
DB search
MPISGTSASDTAKQLDIIFSEEDLPYEEEILRNPYSVKHWIRYIDHKKKAPKQGVNLIYE
RALKELPGSYKLWYNYLRTRRQQVKNRCITDPGYEEVNNAFERSLVFMHKMPRIWMDYCT
FLTDQNKITRTRKVFDRALRALPVTQHHRIWPLYLGFVKKHNILETGVRVFRRYMKLFPE
NAEEYVEYLTEAGRLDEAALVLAKIVNDENFVSQNGKSKHQLWNELCELISNNPDKVHSL
NVDAIIRGGLRRYTDQLGHLWNSLANYYVRSGLFDRARDIYEEAIQTVTTVRDFTQVFDA
YAQFEELSLSKRMEEVAKLTKPSDDDNIDLELRLARFENLMERRLLLLNSVLLRQNPHNV
SQWHKRVQLYEGKPHDIINTYTEAVQTVKPKLAVGKLHTLWVEFAKFYEKNGQIEDARLI
FKKGTEVEYVKVDDLASVWCEWTEMEIRNENYEESLKLMHRATVLPARKVAYHDESETVQ
SRLYKSLKVWSMYADLEESFGTFKSCKAVYDRIIDLKIATPQIIINYGIFLEENNYFEEA
FRAYEKGISLFKWPNVYDIWNTYLSKFLKRYGGSKIERARDLFEQCLEHCPQQFAKHLYL
LYAKLEEEHGMARHAMAVYEKATKAVPEKEMLEVFNIYIKRAAEIYGIPKTRQIYEKAIE
VLPEGDTRDMCLRFADMETKLGEIDRARAIYAHCSQICDPRVTTEFWQTWKEFEVRHGNE
DTMREMLRIKRSVQATYNTQVNMMSAQMLSSAGTLTGTTADLAPGEKDGMRLLEAKAAEM
AGSAGAGQRPGNIMFVRGETQGDKKDKVVNPDEIDIDDDDDEDDEVGEDLEQQSVPAEVF
GSLKKPDVEN
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgccgattagtggtaccagtgccagtgatacggcaaaacaactggatataatcttttct
gaagaagatttaccctacgaagaggaaatcctcagaaacccctattcagtcaaacattgg
atccgatatattgatcacaagaagaaagctcccaaacaaggtgtaaatctaatctacgag
cgtgcccttaaagaacttcctggttcatataagttgtggtacaattatttgcgaaccaga
agacaacaagttaaaaacaggtgcattactgaccctggatatgaagaagttaataatgct
tttgaaaggtctttggtttttatgcataaaatgcccagaatttggatggactactgcacc
tttttaacagatcaaaacaaaataacccgcactcgaaaggtttttgacagggccttaaga
gccttaccagtcacccagcaccaccgcatctggcctttatatttgggctttgtgaagaag
cataatatcctggaaacgggcgttcgagtgtttagaagatacatgaagttatttccagaa
aatgctgaagagtatgtggaatatctaacagaagctgggaggttggatgaagcagcattg
gttcttgctaaaattgtaaacgatgaaaactttgtgtcacaaaatgggaaatccaagcat
cagctctggaatgagttatgtgaattgatttctaacaatcctgataaggtgcattcttta
aatgtagatgcaattattcggggaggtttaagacgttatactgatcagctgggtcattta
tggaactcgcttgctaattattatgtgaggagtggtttgtttgatagggcccgagacata
tatgaagaagctattcaaactgtcaccactgtcagggattttactcaagtgttcgatgct
tatgctcagtttgaagaattgagtttgagcaaacgcatggaggaagtggctaaattgacc
aagccttcagatgatgataacattgatttggagctgcgattggccaggtttgagaatttg
atggagagaagattattgcttttaaactctgtattactgcgacaaaatccgcataacgtt
tctcaatggcacaagagagtgcagttgtacgagggaaaacctcatgatattattaataca
tatactgaagcagtgcagactgtcaagcctaaattggcagtggggaaactgcatacactc
tgggtggaatttgccaagttttacgagaaaaatggccaaattgaagacgcgagattgatt
tttaaaaaaggaactgaagtagagtatgttaaggtcgatgaccttgcttcagtttggtgc
gaatggactgaaatggaaatcagaaacgaaaactatgaagagtctctcaaactcatgcat
cgagctacagttcttcctgccagaaaagtggcctaccacgacgaatctgaaactgtccaa
tcaagactttacaaatccttgaaagtctggtctatgtatgccgatctcgaagagagtttc
ggtactttcaagtcttgtaaagcagtctatgatcgaattattgacctgaagattgcgacc
cctcaaataatcatcaactacggaatatttctggaggaaaacaattactttgaagaagct
tttcgagcttacgaaaagggaatttccttgttcaaatggcctaatgtctacgacatttgg
aacacgtatctatcaaaatttttaaaacggtatgggggatcgaaaattgaaagggccaga
gacttgtttgagcagtgtctggaacactgtccccagcaatttgctaaacatttatattta
ctctacgcaaagctggaagaagagcatggtatggcgagacacgcaatggcggtttatgag
aaagccaccaaggcggtaccagaaaaagagatgctggaagtgtttaatatttacattaag
agagcggctgagatttatgggattccaaagacaaggcagatttatgaaaaggccattgaa
gtgctgcctgaaggtgatacaagggatatgtgtctgaggtttgccgatatggagactaaa
ttaggagaaattgatagggcccgcgcgatatacgctcactgcagccaaatctgcgatcct
agagtcaccacagaattttggcagacttggaaggaatttgaagttagacatggcaatgaa
gatactatgagagaaatgttgcgtataaaacgaagcgtgcaagccacttacaacactcaa
gtgaatatgatgtccgcgcaaatgttgagctcagctggaactctaactggaacaactgcc
gatttagcaccaggtgaaaaggacggaatgcgcttgttggaagcaaaagctgcagaaatg
gctggatctgcaggcgccggtcaaagacctggcaacattatgtttgtacgaggtgagaca
caaggagacaaaaaggataaagttgttaatcctgatgaaatcgatattgatgatgatgat
gatgaagacgacgaggtaggagaggatttagaacagcagtctgttccggcagaggtgttt
ggaagcttgaaaaagcccgatgtagaaaactga
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