Euwallacea similis: 136419301
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Entry
136419301 CDS
T10684
Symbol
Sym
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
esim Euwallacea similis
Pathway
esim03015
mRNA surveillance pathway
Brite
Transcription machinery [BR:
esim03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
136419301 (Sym)
Messenger RNA biogenesis [BR:
esim03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
136419301 (Sym)
U7-dependent histone pre-mRNA processing factors
136419301 (Sym)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
136419301
NCBI-ProteinID:
XP_066261627
LinkDB
All DBs
Position
2:complement(1084804..1124968)
Genome browser
AA seq
1070 aa
AA seq
DB search
MATLSDEEEVVENINNALVSPQASEKVHFLAKVKELLLYKYPHLLLKYLPNVLGFVTDKQ
QDVKRNLVGFIEELCKVRENFISKIMATLHMLLCDESIQVQKRVIQATITIYRRTLSWIC
RAPTITEEMEEGWKQLNTIKLEIANMIDSDNDGIRTSSVKFLECVVLLQSYPDEAETKKV
NDFSLDNVPLTLKIARRRKLEEEASNLFELLVKFHGSPHISSANLLACIGVLTNIAKNRA
EFMVRVVEALELLYNNLPPTLTATQVNAVKKKLKTEISGLVKHPGAYEYLSRLSHLLLEL
GCSQSEINKMVPKSDERRKYQKRALSSDSYARASKRLRSERVQEVFSLETESEQSSLPPP
RTPQEANERFINENLTIEKAIYLIFTNIPKLPQTSPASFNKDYAKYMLSGRIGKEYLAEA
LAAQWVEAKVGPGVDVKVMEEKREISKRKREVDEGKKEEVKTSKKEVPKTPKTRSLKLAD
VTKPLMRDVKEKLLVSAVRRLLRCDKLKSKNLQQKIITTLASNFNPSVRETILTFLLSDL
RSNVDTALAWLFEEYSITQGFTRIPPLRKGMRPEECYNVLLCSFIQSSAHDPLVLFRLLL
EAPLITDEALEEVKIICRDEKRSGCVLGLLRDLTLRKPPKQLNFLNALLAYTTYESNVVR
DAAINHILDLHKNFELKLIIEEFAKMNLEFLKLSKPPESLCGENQGRIKSEVWSDDFIKA
CLLPYISLLPVNSSLIHDLAKVYIQTSADIKRIILRLIEGPIRTMGMHCPDLIQLVEDCV
KGSETLVTRVIHILTDKVPPTAELVEKVKELYNTKVSDVRFLIPVLNGLSKQEITSALPK
LIKLNPVVVREVLNRVLWQYGDSPISPTELLVALHLIDPNQADLKTIIKAVSLCMQEKQV
YTQEVLAVVLQQLMDQTPIPTLLMRTVIQALGSYPRLSGFVMNILQRLILKQVWKHKVVW
EGFIKCCQRTKPQSFAVLMQLPAPQLTEVLTLCRELKTPLQEHLNTFTEAQRMHVPSEVQ
EIILNSFSGPPNATVGPDRRMMGVEVKSPSSMVQQRSMGMPSELLPPGMD
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctctctgatgaagaagaagtggtagagaatattaataatgccttagtaagt
ccacaagctagtgagaaagttcactttcttgctaaggttaaggagcttcttctgtataaa
tatccgcatttgcttttgaaatatctaccaaatgtgctcggttttgtgaccgataagcag
caagatgttaaaaggaatttagttgggtttattgaggaattatgcaaagtgcgagagaat
ttcatctccaaaataatggcaaccctacacatgttactctgtgatgaatcaattcaagta
caaaaacgagtaattcaagccaccattacaatataccgccgcactctatcttggatatgt
cgcgctccaactatcactgaggaaatggaagagggctggaagcagttgaatactattaaa
ctagaaattgctaatatgattgatagtgacaatgacggaatcaggaccagttctgtaaag
tttctggaatgcgttgttttattgcaaagctatcctgatgaagcagagacgaagaaagtc
aatgatttttccttagataatgtaccgttaaccttgaaaattgctcgtagaaggaaatta
gaagaagaggctagtaatttgtttgaacttttggtaaaattccatggatctcctcatatt
agcagtgcaaatttattagcatgtattggtgttttaactaacatagcgaaaaacagggcg
gaatttatggttagagttgtggaggctctcgaactgctttacaacaatttacctcctact
ttaactgcaactcaagtcaacgctgtgaagaaaaagctgaaaactgagatttcaggttta
gtgaaacaccctggtgcttatgaatacttgagtcgattaagccatcttttattggaattg
ggttgttctcaaagtgaaataaacaagatggttcctaaatcagatgaaagacgcaagtac
caaaaaagagctctttcttcagattcatatgcaagagcctcaaaacgacttcgttctgag
agagttcaagaggtattttccttagaaactgaatccgagcaatcatctttgcctccccct
cgcactcctcaagaggcaaatgagaggttcataaatgagaatctcacaattgaaaaggca
atttatctcatttttaccaacattccaaaacttccacaaacatcacctgccagttttaat
aaagattatgctaaatatatgctcagtgggagaattggaaaggaatatttggctgaagct
ttagctgctcaatgggtggaagccaaagttggacctggagttgatgttaaagttatggaa
gagaaaagggagatttctaaaagaaagagggaggttgatgaaggcaaaaaggaggaagtg
aagacttcaaagaaagaagttccaaagactccgaaaacgagatctttgaaactagcggat
gttactaaacctttaatgcgggacgtgaaggagaagctgttggtttctgcagtgcggagg
ttattgcgttgcgataagttgaagagcaagaatctgcagcagaaaattatcaccactttg
gcatctaatttcaatccgtcggtaagggagaccatattgacgtttttgctgtccgatctt
cgctccaatgttgatacggctttggcttggttatttgaagaatacagtataactcaggga
tttacaagaatccctcctttacgtaaagggatgaggcctgaagagtgctataatgtactg
ctgtgcagcttcattcagtcatctgcgcatgacccacttgtgctttttcgacttctttta
gaagctcctctaatcacggatgaggctttagaagaagtaaagataatttgcagagacgag
aaaagatctggttgtgtgctaggattgctcagagaccttaccctcagaaaaccaccgaaa
caattgaacttcctaaacgctcttttggcctatacaacatacgaatccaacgtagttcgt
gacgcagctataaaccatattttagacttacacaaaaattttgaactgaagcttatcatt
gaggaatttgcgaaaatgaatttggagtttttgaaattgtccaagcctcctgaaagtcta
tgcggggaaaaccagggaagaatcaaaagcgaagtttggagtgacgatttcattaaagcc
tgtcttttgccttatatttctttgctccctgttaattcctcacttattcacgatttggca
aaggtctacatccaaactagtgcagacattaaacgtatcatacttcgcctcattgaaggt
cctataagaactatggggatgcattgcccggatttgattcagttggtggaagactgtgtt
aaagggtcggaaactcttgtgactagagtgattcatattttaacagataaagtgcctccc
actgctgaattggtagagaaggtgaaggaattgtataatacaaaagtatcggacgtgcgg
tttttgatacccgttttaaatggcttgtctaaacaggagatcacgtcggccctccctaag
ttaatcaaactcaaccctgtggtggtccgtgaagttctcaacagagtcctgtggcaatat
ggtgatagtcccatatcccccactgaactactagtagccttacatctgatagatcccaat
caagctgacttaaagactatcatcaaagctgtgtctttatgcatgcaagaaaagcaggta
tacactcaagaggttttagcagtagttttgcagcaattaatggaccaaacccccattcct
acattactaatgagaactgtaattcaggctcttgggagctatccccgattatcaggattt
gtaatgaacatcttacagagacttattctaaagcaggtgtggaagcataaagtggtgtgg
gagggttttataaagtgctgccaacgcactaaacctcagagtttcgcggtattgatgcag
ctgcctgctcctcaactcactgaagttttaaccctctgcagagagcttaaaacaccccta
caagaacatttgaatacgttcactgaggctcagcgcatgcatgttccctctgaggtgcaa
gagattattttgaatagtttttcaggacctccaaatgcaactgtcgggcctgatcgtcgt
atgatgggcgtggaagtcaagagtccttcttcaatggtacagcaacgctccatgggcatg
ccttcagaacttttacctcctggaatggattaa
DBGET
integrated database retrieval system
