Sinorhizobium sojae: SJ05684_b55280
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Entry
SJ05684_b55280 CDS
T05052
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
esj
Sinorhizobium sojae
Pathway
esj03030
DNA replication
esj03430
Mismatch repair
esj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
esj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SJ05684_b55280
03430 Mismatch repair
SJ05684_b55280
03440 Homologous recombination
SJ05684_b55280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esj03032
]
SJ05684_b55280
03400 DNA repair and recombination proteins [BR:
esj03400
]
SJ05684_b55280
Enzymes [BR:
esj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SJ05684_b55280
DNA replication proteins [BR:
esj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SJ05684_b55280
DNA repair and recombination proteins [BR:
esj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SJ05684_b55280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ANTAR
Rv2179c-like
DUF7025
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ASY66510
UniProt:
A0A249PKP3
LinkDB
All DBs
Position
pSJ05684b:complement(1471146..1472120)
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AA seq
324 aa
AA seq
DB search
MASQLDMFSSPPEPGDDVVKLRGPLKLRRQTPLDDEGMARLLEESGSYRVLRKLVGRKIV
DIPRPGFPRVGVIVDTETTGLDHSKHEIIEIGAVAFTFDDEGHIGDVTGVYGGLQQPTVP
IPREITRLTGITDEMVAGQMIDVESLRVLLDPADLVIAHNAGFDRPFCEAFSSMFCGKAW
ACSVKEVDWATRGFEGTKLGYLIGQSGYFHDGHRAVDDCFALLEVLAGRDGATEPSAFTE
LLETSQRSRVRIFAEHSPFDMKDHLKARGYRWSDGSDGRPKSWWIEIDEERLTAELAFLR
SEIYRWEEADPPVKRLTAFDRYKA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcagctggatatgttttcctcgccacctgagccaggggatgacgtcgtaaag
ctgcgaggacccttgaagctgcggcggcagacgccacttgatgacgagggtatggcccgg
cttttggaggagagcggcagctatcgtgtgctgcgcaagcttgtcggtcgcaaaatcgtc
gatataccgcgcccgggatttcctcgcgtcggagtgattgtcgacaccgagacgacgggc
ctcgaccacagcaagcacgagatcatcgaaatcggcgcagttgcgttcacctttgacgac
gagggccatatcggcgacgtcacgggcgtttacggcggcctgcagcagccaaccgtccca
atcccccgtgaaatcacccgccttacaggaatcacggacgagatggttgccgggcagatg
atcgatgtcgaatcgcttcgagtgttgctcgacccggccgacctggtgatcgcccacaat
gccggcttcgatcgtccgttctgcgaggcgttctcgagcatgttttgcggcaaggcatgg
gcctgttccgtcaaggaagtcgattgggcgacgcgcgggttcgagggcacgaagctcggc
tacctgattggtcaaagtggctacttccacgacggtcatcgcgccgtcgacgactgtttt
gctctgctcgaggtgctcgccggccgcgacggggcgacggagccaagcgcttttacggaa
cttctcgagacaagtcagcgctcgcgcgtgcgcatcttcgccgagcacagccccttcgac
atgaaggatcatctgaaggctcggggataccgctggtcggatggcagcgacggccgtccg
aaatcctggtggatcgaaatcgacgaggagcggctcaccgcggagctcgctttcctgagg
tcagagatctaccggtgggaagaggccgacccaccggtcaaaaggctgacggcgttcgat
cggtacaaggcttga
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