Sinorhizobium sojae: SJ05684_c00140
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Entry
SJ05684_c00140 CDS
T05052
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
esj
Sinorhizobium sojae
Pathway
esj02020
Two-component system
esj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
esj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SJ05684_c00140
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SJ05684_c00140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esj03021
]
SJ05684_c00140
Transcription machinery [BR:
esj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SJ05684_c00140
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
ASY61487
UniProt:
A0A249P705
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Position
complement(11889..13448)
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AA seq
519 aa
AA seq
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MALSASLHLRQSQSLVMTPQLMQSIQLLQMTHLELTQFIAQEVEKNPLLEFQAGEEALVD
QDRGEAASPAADRSDGFEEEATGQADLYDSATSRSSERLSVELDSDFANVFPDDTVAQRA
DAPELLGQWKSMPGAGDGDNGEGYDLDDFVAGRATLRQTLLEQLPFALSAPGDRLIAQHL
IDQLDEAGYLHADLAETATRLGAMTEDVTRVLLALQQLDPPGVFARSLSECLAIQLRARN
RLDPAMEALIANLELLARRDFASLKKLCGVDEEDLVDMLAEIRKLDPKPGTGFETGITEA
IIPDVVVRASPDGGWLVELNPDALPRVLVNHDYFAKISRGSLKNSAEQAFLSECLQNANW
LTRSLDQRARTIIKVASEIVRQQDSFLLNGVDHLRPMNLRIVADAIKMHESTVSRVTSNK
YVLTPRGLFELKYFFTVSIGSAENGDAHSAESVRHRIRTMINEESADAVLSDDDIVDLLK
KTGVDIARRTVAKYRESMNIPSSVQRRREKRALAKAAGF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggccttgtccgccagcctacatttgcggcagtctcagtcgctggtcatgacgccgcaa
ctgatgcagtcgatccaactgcttcagatgacgcatcttgagctgacgcaattcatcgcc
caggaagtcgagaagaatccgctgcttgaatttcaggccggcgaggaagcgctcgtcgac
caggaccgcggcgaggccgcgtcgcctgccgccgaccgctctgacggtttcgaagaagaa
gcaacgggccaggcagacctctacgacagcgccacctcacgctcgagcgagaggctcagc
gtcgagctcgactccgatttcgccaatgtttttccagacgacacggtggcgcagcgcgcc
gacgctccggaactgctcggccaatggaaatcgatgccaggggcgggcgacggcgacaat
ggcgaaggatacgaccttgacgatttcgtcgcgggccgggcgactttgcggcaaaccctc
ctcgaacagcttccttttgcgctgagcgcgcccggcgaccgcctgatcgcccagcatctc
atcgaccagctcgacgaagcgggctatctgcatgccgatctggcagagactgcgacgagg
ctcggcgcaatgacagaggacgttacacgcgtccttcttgcgctacagcaactggacccg
cccggcgtcttcgcgcgttcgctcagcgaatgccttgccatccaattgcgggcgcgcaac
cgtctcgatccggccatggaagcgctgatcgccaatctcgaacttctggcgcgccgcgac
ttcgcaagcctcaagaagctctgcggggtcgacgaggaggatctcgtcgacatgctcgcc
gaaatccgcaaactcgacccgaagccgggcacgggcttcgagacgggcatcaccgaagcg
atcatccctgatgtcgtcgtgcgcgcctcccctgacggcggctggctggtcgaactcaat
cccgacgcattaccgcgcgttctcgtaaatcacgactattttgccaaaatctcgcgcgga
agcctgaaaaacagcgccgaacaggcctttctcagcgaatgcctgcagaacgctaattgg
ctgacgcgcagcctcgaccagcgagcgcggacgatcataaaggtggcgagcgagatcgtt
cggcagcaggactctttccttctgaacggcgtcgatcacctgcggccgatgaacctcagg
atagtcgccgacgcaatcaagatgcatgaatcgacggtgagtcgcgtcacctcgaacaag
tacgtgctgactccgcgcggcctgttcgaattgaagtatttcttcaccgtctccatcggt
tcggcggaaaacggcgacgcccactcggcggagtcggttcgccatcgcatccgcacaatg
atcaacgaggaaagcgccgacgccgtgctttcggacgacgatatcgtcgatctgctcaag
aagaccggcgtggacatcgcgcgccggaccgttgccaaatatcgcgagtcgatgaatatc
ccctcttccgtgcagcggcggcgcgaaaagcgcgcgctcgccaaggccgccggcttctga
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