Sinorhizobium sojae: SJ05684_c08320
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Entry
SJ05684_c08320 CDS
T05052
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
esj
Sinorhizobium sojae
Brite
KEGG Orthology (KO) [BR:
esj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
esj03016
]
SJ05684_c08320
Enzymes [BR:
esj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SJ05684_c08320
Transfer RNA biogenesis [BR:
esj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SJ05684_c08320
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-ProteinID:
ASY62295
UniProt:
A0A249P943
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All DBs
Position
complement(820386..821516)
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AA seq
376 aa
AA seq
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MEAACQALARSSYITIDTEFLRETTFWPELCLIQMANPEMAVIVDPMAPGIDLAPFFALM
ANADVVKVFHAARQDIEIIHHLGDLIPHPLFDTQVAAMVCGFGDSVSYDQLVSRIKNEQI
DKSSRFTDWSRRPLTDKQLEYALADVTHLRDIYEYLRTELEREGRSSWLAEEMAILESRE
TYDLHPDNAWQRLKLRVRKPIELAVLQKLAAWREREARGRNVPRGRILKDDAIYEIAQQQ
PKDAEALGRLRTIPKGWERSSSGAAIVEAVNEALAIPKAELPRLPRQNHAPEGAGAAGEM
LKVLLKLISEKEGVAAKIIANSEDLDRIAAEGEKADVAALKGWRRELFGDKALKLINGEV
ALRFVDKKIETMTISD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
ttggaggccgcctgccaggcgctggcccgctcgagctacattaccatcgacaccgagttc
ctgcgtgaaaccaccttctggccggagctctgcctgattcagatggccaaccccgaaatg
gccgtcatcgtcgatccgatggcgccggggatcgatctcgcgccgttcttcgcgctgatg
gccaacgcggacgtcgtcaaggtcttccatgccgcgcgccaggatatcgagatcatccat
catctcggcgacctcatcccgcatcccctgttcgacacgcaggtggccgccatggtgtgc
ggcttcggcgacagcgtctcctacgaccagctcgtcagtcgcatcaagaacgaacagatc
gacaagtcctcacgcttcaccgactggagccgcaggccgctgacggacaagcagctcgaa
tatgcgctggccgacgtcacgcatctccgagacatctacgagtatctcaggacggaactc
gagcgtgaaggacgctcctcctggctcgccgaggaaatggcgatcctcgaaagccgcgag
acctacgacctccatccggacaatgcctggcagcgcctgaagctgcgcgtcagaaagccg
attgagcttgcagtgctgcagaagttggcagcctggcgcgagcgcgaggcgcgcggccgc
aacgtgccgcgcggccgcattctgaaggacgacgcgatctacgagatcgcccagcagcag
ccgaaagatgcggaggcgctcggccgcctccggactattccgaagggctgggaacgctcc
agctccggcgcggccatcgtcgaggcggtgaacgaggcacttgcgattcccaaggccgaa
ctgccgcgattgccgcgacagaatcatgccccggagggcgcgggggcagcgggcgagatg
ctgaaggtgctgctgaagcttatctccgagaaggaaggcgttgcggccaagatcatcgcc
aatagcgaagatctcgaccggattgccgcggaaggcgagaaggcggacgtcgccgcgctc
aagggatggcgccgcgagcttttcggcgacaaggcgctcaagctcatcaatggcgaggtt
gctttgcgtttcgtcgacaagaagatcgagacgatgacgatcagcgattga
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