Sinorhizobium sojae: SJ05684_c11660
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Entry
SJ05684_c11660 CDS
T05052
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
esj
Sinorhizobium sojae
Pathway
esj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
esj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SJ05684_c11660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esj03021
]
SJ05684_c11660
03400 DNA repair and recombination proteins [BR:
esj03400
]
SJ05684_c11660
Enzymes [BR:
esj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SJ05684_c11660
Transcription machinery [BR:
esj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SJ05684_c11660
DNA repair and recombination proteins [BR:
esj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SJ05684_c11660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
ASY62622
UniProt:
A0A249PA43
LinkDB
All DBs
Position
1131824..1135966
Genome browser
AA seq
1380 aa
AA seq
DB search
MAQTLSFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVEEPAGGRPDEGLQAVFK
SVFPIKDFSGASMLEFVSYEFEPPKFDVEECRQRDLTYAAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQNVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDAKDIVHARIDRRRKIPVTSLLMALGMDGEEILETFYTKSLYQR
DGDGWRVPFQPDALKGQKAVSEMIDAETGEVVVEAGKKLTPRLLRQLQEKGLKALKATDD
DLYGNYLAEDVVNFETGEIYLEAGDEIDEKTLPVILEAGFDEIPVLDIDHINVGAYIRNT
LAADKNENRQDALFDIYRVMRPGEPPTMDSAEAMFNALFFDAERYDLSAVGRVKMNMRLD
LDVPDTVRTLRKEDILAVVKMLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRLGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQVNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRKIVDGKVTNDVVYLSAMEEAKYHVAQANSVLNEDGSFAEEFVVCRHAGEVMLAPRDNI
NLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGMEPVVAR
DSGAAIAARRGGIVDQVDATRIVIRATEDLDPSKSGVDIYRLQKFQRSNQNTCVNQRPLV
TVGDAVNKGDIIADGPSTDLGDLALGRNALVAFMPWNGYNYEDSILLSERIVRDDVFTSI
HIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTIVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYARLIDMLRGHVAVAGPKGFKKGTELSNAVVSEYPRSQWW
MFAVEDEKAQGEIEALRAQYDESKSRLEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KIQPGDKMAGRHGNKGVVSRIVPIEDMPFLEDGTHVDVVLNPLGVPSRMNVGQILETHLG
WACAGMGKKIGAMLDAYHENGDISPLRTTIDDVIGSGPKGEPIKQYDDESIVRLAEQTRR
GVSIATPVFDGAVEADVNEMLEKAGLKVTGQSTLFDGRTGEPFDRQVTVGYIYMLKLNHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLSVELENSKVDDLGTAAQLPDAAE
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccctttcgtttaacggtcgcaggcgcgtacgcaagttttttggtaagatt
ccagaagtcgcggagatgccgaacctcatcgaggttcagaaggcgtcctacgaccagttc
ctcatggtggaagagcccgcaggcgggcgtccggatgagggactccaagccgttttcaag
tcggtatttccgatcaaggatttctcgggtgcttcgatgctcgaattcgtatcctacgaa
ttcgagccgccgaaattcgacgtcgaagagtgccgccagcgcgacctgacctatgcggcg
ccgctgaaggtgacgctccgcctcatcgtgttcgatatcgacgaggacaccggtgccaag
tcgatcaaggacatcaaggaacagaacgtctacatgggcgacatgccgctcatgacggac
aacggcaccttcatcgttaacggcaccgagcgcgtcatcgtctcgcagatgcaccgctcg
ccgggcgtgttcttcgatcatgacaagggcaagagccattcgtccggcaagctgctcttc
gcagcgcgcgtcattccctatcgcggttcctggctcgacatcgagttcgacgccaaggac
atcgtccatgcccgtatcgaccgccgtcgcaagattccggtgacgtcgcttctgatggcg
cttggcatggacggcgaggaaatcctcgagaccttctacacgaagtcgctgtaccagcgc
gacggcgatggctggcgcgtgccgttccagccggatgcgctgaaaggtcagaaggcggtt
tccgagatgatcgacgccgagaccggcgaggtcgtggtcgaggctggcaagaagctgacg
ccccgcctgctgcggcagttgcaggaaaaggggctgaaggccctgaaggcgaccgacgac
gatctctacggcaactatcttgccgaggacgtggtcaacttcgaaaccggtgagatctac
ctggaagccggcgacgagatcgacgaaaagacgcttccggtcatcctcgaggctggcttc
gacgagattccggtgctcgatatcgaccacatcaatgtcggtgcctatatccgcaacacg
cttgccgctgacaagaacgagaaccggcaggacgcgctcttcgacatttatcgcgtcatg
cgtccgggcgagccgccgaccatggattcggccgaagccatgttcaacgcgctgttcttc
gatgcggagcgttacgacctctccgccgttggccgcgtcaagatgaacatgcgcctggac
ctcgacgttccggatacggttcgcacgctgcgcaaggaagacatcctggctgtcgtcaag
atgcttgtcgagctgcgtgacggcaagggcgagatcgacgacatcgataacctcggcaac
cgccgcgtccgctcggtcggcgaactgatggagaaccagtatcgcctgggtctcctgcgc
atggaacgcgccatcaaggagcgcatgtcctcgatcgagatcgacacggtcatgccgcag
gacctgatcaacgcgaagccggcagccgccgccgttcgcgagttcttcggctcctcgcag
ctctcgcagttcatggaccaggtgaacccgctttcggaaatcacccacaagcgccgcctg
tcggctctcggcccgggtggtctgacgcgtgaacgcgccggcttcgaagtccgcgacgtg
catccgacccattacggtcgtatctgcccgatcgagacgccggaaggtccgaacatcggc
ctcatcaactcgctcgcaacctttgcccgcgtgaacaagtacggcttcatcgagagcccg
taccgcaagatcgtcgacggcaaggtgacgaacgacgtcgtctacctgtcggcgatggaa
gaggccaagtaccacgtggcgcaggcgaattcggtgctgaacgaggacggctctttcgcg
gaagaattcgtcgtttgccgtcacgccggcgaagtcatgctggcgccgcgcgacaacatc
aacctgatggacgtttcgccgaagcagctcgtttcggtcgcggcggcactcatcccgttc
cttgagaacgacgacgccaaccgtgctctcatgggttcgaacatgcagcgtcaggccgtg
ccgctgctgagagccgaggcgccgtttgtcggcaccggcatggaaccggtcgtggctcgc
gattccggggctgccatcgccgctcgccgcggcggtatcgtcgatcaggtcgatgcaacg
cgtatcgttatccgcgccaccgaagacctcgatccgtcgaagtcgggcgtcgatatctac
cgcctgcagaagttccagcgttcgaaccagaacacctgtgtcaaccagcgtccgctggtc
accgtgggcgacgcggtcaacaagggcgatatcatcgcggacggtccctcgaccgacctc
ggcgatctggcgctcggccgcaacgcgctggtcgcgttcatgccgtggaacggctacaac
tacgaggactcgatcctgctttccgagcggatcgtacgcgacgacgtgttcacctccatc
cacatcgaagaattcgaggtgatggcgcgtgacactaagcttggtccggaagaaatcacg
cgcgacattccgaacgtttcggaagaggcgctgaagaacctggacgaagccggtatcgtc
tacatcggtgccgaagttcagccgggcgacatcctcgtcggcaagattacgccgaagggc
gaaagtccgatgacgccggaagaaaagcttctgcgcgccatcttcggtgaaaaggcgtcc
gacgtgcgcgacacgtcgatgcgcatgccgcccggcaccttcggcacgatcgtcgaagtg
cgcgtcttcaaccgccacggcgtggagaaggacgagcgcgcgatggcgatcgagcgcgag
gagatcgaacggctcgccaaggaccgcgacgacgaacaggcgattctcgatcgcaacgtc
tatgcgcgtctcatcgacatgctgcgtggtcacgttgctgtcgccgggccgaagggcttc
aagaagggcaccgagctttcgaacgccgtcgtcagcgaatatccgcgttcgcagtggtgg
atgttcgccgtcgaggacgagaaggcccagggcgaaatcgaagccctacgcgcccagtac
gacgagtccaagtcgcgcctcgaacagcgcttcatggacaaggtcgaaaaggttcagcgc
ggtgacgagatgcctccgggcgtcatgaagatggtcaaggtctttgtcgccgtgaagcgc
aagatccagccgggcgacaagatggccggccgtcacggcaacaagggtgtcgtgtcgcgg
atcgtgccgatcgaagacatgccgttcctcgaagacggtacgcatgtcgacgtcgtgctg
aacccgctcggcgtgccgtcgcgcatgaacgtcggtcagattctcgagacgcacctcggt
tgggcttgcgccggcatgggcaagaagatcggggcgatgctcgacgcctatcatgagaat
ggcgacatctcaccgttgcgcacgacgatcgacgacgtcatcgggtccggcccgaagggc
gaaccgatcaagcagtatgatgatgaatcgatcgtaaggctggccgaacagacccgccgt
ggcgtgtcgatcgcgacgccggtcttcgacggcgccgtggaggccgacgtcaacgagatg
ctcgaaaaggccggcctcaaggtgacgggccagtcgacgctcttcgacggacgcacgggt
gaacctttcgaccgccaggtcacggttggctacatctacatgctgaagctcaaccacctg
gtcgatgacaagatccacgcgcgttcgatcggaccgtactcacttgtcacgcagcagccg
cttggcggcaaggcgcagttcggcggccagcgcttcggcgaaatggaggtctgggcgctg
gaggcttacggcgctgcctatacgctgcaggaaatgttgacggtcaagtcggacgacgtg
gccggacgcaccaaggtctacgaagcgatcgtccgtggcgacgacacgttcgaagcgggc
attccggagagcttcaacgttctcgtcaaggaaatgcgctcgctcggcctctcggtcgag
ttggagaactccaaggtcgacgatcttggcaccgcggcgcagttgccggacgcagcggag
taa
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integrated database retrieval system
