Sinorhizobium sojae: SJ05684_c23580
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Entry
SJ05684_c23580 CDS
T05052
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
esj
Sinorhizobium sojae
Pathway
esj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SJ05684_c23580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esj03019
]
SJ05684_c23580
03400 DNA repair and recombination proteins [BR:
esj03400
]
SJ05684_c23580
Enzymes [BR:
esj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SJ05684_c23580
Messenger RNA biogenesis [BR:
esj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SJ05684_c23580
DNA repair and recombination proteins [BR:
esj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SJ05684_c23580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
HHH
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ASY63798
UniProt:
A0A249PD06
LinkDB
All DBs
Position
complement(2294390..2296252)
Genome browser
AA seq
620 aa
AA seq
DB search
MPDSHNSTTRLFETDGARNPVDLLKRVYGYSAFRGQQQAVVEHVVAGGDAVVLFPTGAGK
SLCFQIPALCRRGVGIVVSPLIALMRDQVQALNGLGIRAAALNSSLTRDEAIAVRRALGS
GGLDLLYVTPERAVTPSFAEMVADIDIALFAIDEAHCVSQWGHDFRPEYRGLDCLSSHFP
GVPRIALTATADPHTREDIVERLALNGARVFTSSFDRPNIAYEIVERDQPRQQLLRFLSR
FKDASGIVYCLSRAKVEDTAEWLNAQGIRALPYHAGMDRALRDAHQDAFLKEENLCLVAT
VAFGMGIDKPDVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRRRMID
EGGSPEEVKRIERAKLNALLAICETAGCRRQAILAHFGEAHPGRCGHCDTCLKPVETWDG
TEAAIKALAAVYRTGERFGAGHVVDVLIGTVNEKTERFGHVDMPVFGAGKDLPARTWQSV
FRQLLALGLISVDHAAFGALKLEPEARAVFRRERQLFFRKDRPTGKAPRGQKSSAARERS
ELAGSDLELFERLRAQRLSIARDLDVPPYVVFPDATLIALAKQRPRDFDDLLDIPGIGES
KRERYGEAFLAVIDAFEDGG
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcccgactcccacaactccaccacacgcctgtttgaaacggacggcgctcgcaacccc
gtcgatctcctcaagcgcgtctacggttattccgcctttcgcggccagcagcaggctgtc
gtggagcatgtggtggcgggcggcgatgcggtggtgctttttccgacgggtgccggaaag
tcgctctgctttcagattccggcgctgtgccgtcggggcgtcggcatcgtcgtctcgccg
ctgatcgcattgatgcgcgaccaggtgcaggcgctgaatgggctcggcatccgtgcggcg
gcgctcaactcgtcgctcacccgcgacgaggcgattgcggtccgccgcgccttaggctcg
ggggggctcgacctcctctatgtgacgcccgagcgcgccgtcaccccatctttcgcggag
atggtcgccgacatcgacatcgctctcttcgccatcgacgaggcccattgcgtttcgcaa
tggggccacgatttccggccggaatatcgcggcctcgattgcctctcgtcgcattttccc
ggcgtgccgcggatcgcgctcaccgcgaccgccgatccgcacacgcgtgaggatatcgtc
gagcggttggcgttgaatggtgcgcgtgtcttcacctccagcttcgaccggccgaacatc
gcctacgagatcgtcgaacgcgatcagccccgccagcagctgttgcgtttcctctcccgc
ttcaaggatgcgagcggcattgtctattgcctgtcgcgcgccaaggtcgaggacacggcc
gagtggctgaatgcgcaaggcatccgcgcgctgccttatcacgccggcatggaccgcgcc
cttcgcgatgcccatcaggatgccttcctcaaggaggagaacctctgcctcgtcgccacc
gtcgccttcggcatggggatcgacaagcccgatgtgcgctatgtcgcccatctcgacctg
ccgggctcggtggaggcctattatcaggagacgggcagggccggacgcgacggtctgcca
tcggaagtctggatggcctacggcatggccgacgtcatccagcgccggcgaatgatcgat
gagggcgggtcgcccgaagaggtaaagcgcatcgagcgggcgaagctcaatgcactgctt
gcgatctgcgagaccgcgggctgccgccggcaggcgattcttgcgcatttcggcgaagcc
catcccggccgctgcggccattgcgacacctgcctgaagccggtcgagacctgggacgga
acggaagccgcaatcaaggcgctcgccgccgtctaccgcaccggtgagcgcttcggcgcc
ggccatgtggtcgatgtgctgatcgggaccgtgaacgaaaagaccgagcgcttcggccat
gtggacatgccggtcttcggcgccggcaaggatctgccggcgcgcacctggcagtcggtc
ttccggcagttgctcgccctcgggctgatctcggtcgatcacgccgccttcggggccttg
aagctcgagccggaggcgcgcgccgtcttccgccgggagcggcagctcttcttccgcaag
gaccgccctacgggcaaggcgccccgcggccagaaatcctccgccgcgcgcgagcgctcg
gagcttgcgggctcggatctggagctcttcgaaagactccgtgcgcaacggctgtcgatc
gcccgcgatctcgacgtcccgccctatgtggtcttcccggacgcaaccctgatcgccctc
gccaagcaacgcccgcgcgatttcgacgaccttctcgacattccaggcatcggcgagagc
aagcgggaaagatacggcgaggccttccttgcggtcatcgatgcgtttgaggatgggggt
tag
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