Sinorhizobium sojae: SJ05684_c37030
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Entry
SJ05684_c37030 CDS
T05052
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
esj
Sinorhizobium sojae
Pathway
esj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
esj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SJ05684_c37030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esj03400
]
SJ05684_c37030
Enzymes [BR:
esj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SJ05684_c37030
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SJ05684_c37030
DNA repair and recombination proteins [BR:
esj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SJ05684_c37030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ASY65116
UniProt:
A0A249PH46
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All DBs
Position
3669260..3670099
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AA seq
279 aa
AA seq
DB search
MEGALLLRAELRRPDLRFPFPENFAAAVSGRRILSLSRRAKYLTIDLEGGDVIIAHLGMS
GSFRIETGASPASPGAFHHPRGKDEKHDHVIFHLDAQAGPARVIYNDPRRFGFMDLASRD
TIADHAFFRGLGEEPTGNALDAAYLATRFSGRAQPLKTTLLDQKTIAGLGNIYVCEALWR
AGLSPTRPAGTLVDRRGRAKAALSGLVEAIRGVIADAIAAGGSSLKDHIQADGSLGYFQH
AFSVYDREGEACRTPGCGGTVARISQAGRSTFHCPNCQK
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggagggggcgttgctgctgcgcgccgaattgcgccggccggatctgcgttttcctttc
cccgaaaacttcgcggccgccgtttccggccgccgcattctttcgctgtcgcggcgagcc
aaatatctgacgatcgatctggagggcggcgacgtgatcattgcgcatctcggcatgtcc
ggctccttccgcatcgaaaccggcgcgtcgcccgcgtcccccggcgctttccaccacccg
cgtggcaaggacgagaagcacgaccacgtcatcttccatctcgatgcgcaggccgggccg
gcgcgcgtgatctataacgacccccgccgctttggcttcatggatctggcaagccgcgat
acgatcgccgatcacgccttctttcgcgggctcggcgaggagccgacgggcaatgcgctc
gatgccgcctatctggccacgcgcttctccggcagggcacagccgctaaagacaacgctt
ctcgaccagaagaccatcgccgggctcggcaatatttatgtctgcgaggccctgtggagg
gccgggctttcgcccactcggccggcgggcacactggtcgacaggcgcggccgggcgaaa
gcggccctttcgggcctggtggaggcgattcgcggggtgattgccgacgccattgccgcc
ggtggttcctcgctcaaggaccatatccaggcggatggcagcctcggctatttccagcat
gccttctcagtctatgaccgggagggcgaggcttgccggacgccgggctgtggcggtacc
gtcgcccgcattagtcaggcggggcgctcgaccttccattgccccaactgtcagaaatag
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