Escherichia coli O104 H4 2011C-3493 (EAEC): O3K_06230
Help
Entry
O3K_06230 CDS
T02257
Name
(GenBank) DNA-binding transcriptional regulator CsiR
KO
K15735
GntR family transcriptional regulator, carbon starvation induced regulator
Organism
esl
Escherichia coli O104:H4 2011C-3493 (EAEC)
Brite
KEGG Orthology (KO) [BR:
esl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esl03000
]
O3K_06230
Transcription factors [BR:
esl03000
]
Prokaryotic type
Helix-turn-helix
GntR family
O3K_06230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FCD
GntR
HTH_41
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
AFS73157
LinkDB
All DBs
Position
complement(1275606..1276268)
Genome browser
AA seq
220 aa
AA seq
DB search
MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVN
QKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKLEACDAS
EKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAARYRFIWLRRTVLSVEMLEDKH
DQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMAGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaccattacgtctctggatggctatcgctggctgaagaacgatattattcgcggtaat
tttcaaccggatgaaaaattacggatgagtttgctgacatcgcgttatgcacttggcgtt
gggccgttgcgggaagcactttctcaactggtggcggaacggctggtcacggtggtgaat
caaaaagggtatcgggtggcgtctatgtcagagcaggagctgctcgatattttcgacgcc
cgcgccaatatggaagcgatgctggtcagtctggcgattgcccgcggtggcgatgaatgg
gaggcagacgttctcgcaaaagcgcatctgctcagtaagctggaagcctgtgacgccagc
gagaaaatgcttgatgagtgggatctgcgtcatcaggcgtttcatacagcaattgtggcg
ggctgtggttctcactatttgctgcaaatgcgtgaacggttgtttgatctggcggcgcgc
tatcgatttatctggctgcggcgaacggtgctttcggtagaaatgctggaggataaacac
gatcagcaccagaccctgactgcggcggtactggcgcgagataccgcgcgcgccagtgag
ttaatgcgccagcatttactgacgccaattcccattatccagcaggcgatggctggcaat
taa
DBGET
integrated database retrieval system
