Escherichia coli O104 H4 2009EL-2050 (EAEC): O3M_05405
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Entry
O3M_05405 CDS
T02316
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
esm
Escherichia coli O104:H4 2009EL-2050 (EAEC)
Pathway
esm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O3M_05405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esm03019
]
O3M_05405
Messenger RNA biogenesis [BR:
esm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
O3M_05405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AFS55791
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Position
1100283..1100813
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AA seq
176 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPKPQNASAYRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgacgatggctaccgcccaaacgtaggtatcgtgatttgtaatcgccagggg
caggtaatgtgggcccggcgatttggtcagcactcctggcaatttccgcaaggcggaatc
aaccccggagaatccgcagagcaggcgatgtaccgtgaattgtttgaagaagtaggatta
agccgcaaagacgttcgaatccttgcttcaacgcgtaactggttgcgctacaaattaccg
aaacgtttggtgcgttgggacacgaagccggtttgtatcggccaaaaacaaaaatggttt
ctcttgcagctggtgagcggcgatgcagaaatcaatatgcaaaccagcagtacaccagag
tttgacggctggcgatgggtaagttactggtatccggtcagacaggtggtgtcatttaaa
cgtgatgtctaccgtagggtaatgaaagagttcgcgagtgtggtgatgtcactgcaggaa
aatacgccaaaaccacaaaacgcatctgcttatcgacgtaaaagaggttaa
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