Escherichia coli O104 H4 2009EL-2050 (EAEC): O3M_13205
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Entry
O3M_13205 CDS
T02316
Name
(GenBank) colanic acid/biofilm transcriptional regulator
KO
K13654
GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
Organism
esm
Escherichia coli O104:H4 2009EL-2050 (EAEC)
Brite
KEGG Orthology (KO) [BR:
esm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esm03000
]
O3M_13205
Transcription factors [BR:
esm03000
]
Prokaryotic type
Helix-turn-helix
GntR family
O3M_13205
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
DUF7744
HTH_24
RNA_pol_Rpb4
Motif
Other DBs
NCBI-ProteinID:
AFS57323
LinkDB
All DBs
Position
complement(2710586..2711251)
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AA seq
221 aa
AA seq
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MPGMGKMKHVSLTLQVENDLKHQLSIGALKPGARLITKNLAEQLGMSITPVREALLRLVS
VNALSVAPAQAFTVPEVGKRQLDEINRIRYELELMAVALAVENLTPQDLAELQELLEKLQ
QAQEKGDMEQIINVNRLFRLAIYHRSNMPILCEMIEQLWVRMGPGLHYLYEAINPAELRE
HIENYHLLLAALKAKDKEGCRHCLAEIMQQNIAILYQQYNR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcctggaatgggaaaaatgaaacatgtcagtttgactctgcaggttgagaacgacctg
aaacatcagcttagtattggcgcattaaaacctggcgcacgcctgattactaaaaatctg
gcggagcaattaggtatgagtattacacctgtgcgtgaagcattattacgtctggtttcg
gtgaatgcgctttctgtcgcacctgcacaagcatttacagttccggaagtggggaaacgt
caattagacgaaatcaatcggatccgctacgaactggaattaatggcagttgctctggct
gttgaaaacctcaccccgcaagacctggcggaactccaggaattgctcgagaaattacag
caggcgcaagaaaagggcgacatggaacaaatcattaatgtaaacaggctatttcgctta
gcgatttatcatcgctcaaatatgcccatcctgtgtgagatgattgagcaactgtgggtc
aggatggggcctggtttacattatctctatgaagcgattaatccagcggaattacgggag
catatagaaaactatcatctgttactcgctgcgttaaaagcaaaagacaaagagggatgc
agacattgtcttgctgaaattatgcaacaaaatattgctattttataccagcaatacaat
cgttaa
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