Escherichia coli O104 H4 2009EL-2050 (EAEC): O3M_18815
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Entry
O3M_18815 CDS
T02316
Name
(GenBank) outer membrane usher protein FimD
KO
K07354
outer membrane usher protein
Organism
esm
Escherichia coli O104:H4 2009EL-2050 (EAEC)
Brite
KEGG Orthology (KO) [BR:
esm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
esm02035
]
O3M_18815
Bacterial motility proteins [BR:
esm02035
]
Pilus system
Fimbrial proteins
O3M_18815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
DUF4888
Motif
Other DBs
NCBI-ProteinID:
AFS58428
LinkDB
All DBs
Position
complement(3844917..3847526)
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AA seq
869 aa
AA seq
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MKIPTTTDIPQRYTWCLAGICYSSLAILPSFLSYAESYFNPAFLLENGTSVADLSRFERG
NHQPAGVYRVDLWRNDEFIGSQDIVFESTTENTGDKSGGLMPCFNQVLLERIGLNSSAFP
ELAQQQNNKCINLLKAVPDATINFDFAAMRLNITIPQIALLSSAHGYIPPEEWDEGIPAL
LLNYNFTGNRGNGNDSYFFSELSGINIGPWRLRNNGSWNYFRGNGYHSEQWNNIGTWVQR
AIIPLKSELVMGDGNTGSDIFDGVGFRGIRLYSSDNMYPDSQQGFAPTVRGIARTAAQLT
IRQNGLIIYQSYVSPGAFEITDLHPTSSNGDLDVTIDERDGNQQNYTIPYSTVPILQREG
RFKFDLTAGDFRSGNSQQSSPFFFQGTALGGLPQEFTAYGGTQLSANYTAFLLGLGRNLG
NWGAVSLDVTHARSQLADDSRHEGDSIRFLYAKSMNTFGTNFQLMGYRYSTQGFYTLDDV
AYRRMEGYEYDYDYDGEHRDEPIIVNYHNLRFSRKDRLQLNISQSLNDFGSLYISGTHQK
YWNTSDSDTWYQVGYTSSWVGISYSLSFSWNESVGIPDNERIVGLNVSVPFNVLTKRRYT
RENALDRAYASFNANRNSNGQNSWLAGVGGTLLEGHNLSYHVSQGDTSNNGYTGSATANW
QATYGTLGVGYNYDRDQHDVNWQLSGGVVGHENGITLSQPLGDTNVLIKAPGAGGVRIEN
QTGILTDWRGYAVMPYATVYRYNRIALDTNTMGNSIDVEKNISSVVPTQGALVRANFDTR
IGVRALITVTQGGKPVPFGSLVRENSTGITSMVGDDGQVYLSGAPLSGELLVQWGDGANS
RCIAHYVLPKQSLQQAVTVISAVCTHPGS
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacccactactacggatattccgcagaggtatacctggtgtctggccggaatt
tgttattcatctcttgccattttaccctcctttttaagctatgcggaaagttatttcaac
ccggcatttttattagagaatggcacatccgttgctgatttatcgcgctttgagagaggt
aatcatcaacctgcgggcgtgtatcgggtggatctctggcgtaatgatgagttcattggt
tcacaggatatcgtatttgaatcgacaacagaaaatacaggtgataaatcaggtgggtta
atgccctgttttaaccaggtactccttgaacgaattggccttaatagcagtgcatttccc
gagttagcccagcagcaaaacaataaatgcatcaatttactgaaagctgtacctgatgcc
acaattaactttgattttgcagcgatgcgcctgaacatcactattcctcagatagcgttg
ttgagtagcgctcacggttacattccgcctgaagagtgggatgaaggtattcctgcttta
ctcctgaattataatttcaccggtaacagaggtaatggtaacgatagctatttttttagt
gagctcagcgggattaatattggcccgtggcgtttacgcaacaatggttcctggaactat
tttcgcggaaatggatatcattcagagcagtggaataatattggcacctgggtacagcgc
gccattattccgctgaaaagtgaactggtaatgggagacggcaatacaggaagtgatatt
ttcgatggtgttggatttcgtggtatacggctttactcttccgataatatgtatcctgat
agccagcaagggtttgccccaacggtacgtgggattgcccgtacggcggcccagctaacg
attcggcaaaatggtttgattatctatcaaagctatgtttcccccggcgcttttgaaatt
acagatttgcacccgacatcttcaaatggcgatctggatgtcaccatcgacgagcgcgat
ggcaatcagcagaattacacaattccgtattcaacagtgccgattttacaacgcgaaggg
cgtttcaaatttgacctgacggcgggcgattttcgtagcggtaatagtcagcaatcatca
cctttcttttttcagggcacggcactcggcggtttaccacaggaatttactgcctacggc
gggacgcaattatctgccaattacaccgcctttttattaggactggggcgcaatctcgga
aactggggggcagtgtcgctggatgtgacccatgcgcgcagtcagttagccgacgacagt
cgtcatgagggggattccattcgcttcctctatgcgaaatcgatgaacaccttcggcacc
aattttcagttaatgggttaccgctattcgacacaaggtttttatacccttgatgatgtt
gcgtatcgtcgaatggaggggtacgaatatgattacgattacgacggtgagcatcgggat
gaaccgataatcgtgaattaccacaatttacgctttagccgtaaagaccgtttgcagtta
aatatttcacaatcacttaatgactttggctcgctttatatctctggtacccatcaaaaa
tactggaatacttcggattcagatacctggtatcaggtggggtataccagcagctgggtt
ggtatcagttattcactctcattttcgtggaatgaatctgtagggatccccgataacgaa
cgtattgtcggacttaatgtttcagtgcctttcaatgttctgaccaaacgtcgctacacc
cgggaaaatgcgctcgaccgcgcttatgcctcctttaacgccaaccgtaacagcaacggg
caaaatagctggctggcaggtgtaggtgggaccttactggaaggccacaacctgagttat
cacgtaagccagggtgatacctcgaataatgggtatacgggcagcgccacggcaaactgg
caggccacttacggtacgctgggggtcgggtataactacgaccgcgatcaacatgacgtt
aactggcagctgtctggcggtgtggtcgggcacgaaaatggcataacgctgagccagcct
ttaggggataccaatgttttgattaaagcgcctggcgcaggcggtgtacgcattgaaaat
caaactggcattttaaccgactggcgcggctatgcggtgatgccgtatgccacggtttat
cggtataaccgtatcgcgcttgataccaatacgatggggaattccatcgatgttgaaaaa
aatattagcagcgttgtgccgacgcaaggcgcgttggttcgtgccaattttgatacccgc
ataggcgtgcgggcgctcattaccgttacccagggcggaaaaccggtgccgtttggatca
ctggtacgggaaaacagtaccggaataaccagtatggtgggtgatgacgggcaagtttat
ttaagtggtgcgccattgtctggtgaattactggttcagtggggagacggcgcgaactca
cgctgcattgcgcactatgtattgccgaagcaaagcttacagcaagccgtcactgttatt
tcggcagtttgcacacatcctggctcataa
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