Escherichia coli O104 H4 2009EL-2050 (EAEC): O3M_21160
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Entry
O3M_21160 CDS
T02316
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
esm
Escherichia coli O104:H4 2009EL-2050 (EAEC)
Brite
KEGG Orthology (KO) [BR:
esm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esm03021
]
O3M_21160
Transcription machinery [BR:
esm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
O3M_21160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AFS58893
LinkDB
All DBs
Position
4364456..4367362
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT
ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE
QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL
AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD
NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT
EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM
NLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR
ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaattgggacttgga
accgttgtcgcggtggatgcgcgaactgtcactttacttttcccatctactggtgaaaac
cgtctgtacgcacgcagtgattcccccgtgacccgcgtgatgttcaaccctggtgatact
attaccagccatgacggctggcagatgcaagtcgaagaagtaaaagaagaaaatggcttg
ctgacctatatcggtactcgcctggatactgaagagtccggcgtagccctgcgtgaagtt
ttccttgatagcaaactggtgttcagcaaaccgcaggaccgtctgtttgccgggcagatt
gaccgtatggaccgctttgcgctgcgttatcgcgcgcgtaagtattccagcgaacagttc
cgtatgccgtacagcggcctgcgcggtcagcgtaccagcctgattccgcatcagctcaac
atcgctcatgatgttggtcgccgccacgcgccgcgcgtcctgctggctgacgaagtgggt
ttagggaaaaccattgaagccgggatgatcctgcatcagcaactgctctctggcgctgct
gaacgtgtgctaattatcgtcccggaaaccttacagcatcagtggctggtagaaatgctg
cgccgtttcaacctgcgctttgcgctatttgatgatgagcgttatgccgaagctcagcac
gatgcttacaacccgtttgacaccgaacagctggtgatttgctcgctggattttgcccgt
cgtagcaaacagcgcctggaacatctctgtgaagccgaatgggacctgctggtggtcgat
gaagcgcatcacctggtgtggagcgaagatgcgccaagccgtgaatatcaggccattgaa
caactggcagagcacgtgccgggcgttctgctgctgaccgcgaccccggaacagctgggg
atggaaagccacttcgcccgtctgcgtctgctggacccgaaccgtttccacgattttgcg
cagttcgttgaagagcagaaaaattatcgtccggttgcggacgccgttgccatgctgctg
gcaggtaacaaactgagcaatgacgaactgaacatgctcggcgagatgatcggcgagcag
gatatcgagccgctgttgcaggcagcaaacagcgacagcgaagatgcccagagcgcccgt
caggagctggtttcgatgctgatggatcgccacggcaccagccgcgtgctgttccgtaac
acgcgtaacggtgtgaaaggattcccgaaacgcgagctgcacaccattaaactgccgcta
ccgacgcagtatcagacggctattaaagtctccggcattatgggcgcacgtaaaagtgcg
gaagatcgtgctcgcgatatgctctacccggagcgtatttatcaggaatttgaaggtgat
aacgccacctggtggaacttcgatccgcgcgttgagtggctgatgggctacctgaccagc
catcgctctcagaaagtgctggtgatctgcgccaaagctgccactgcgctgcaactggag
caggtactgcgcgaacgtgaaggtattcgcgctgcggtgttccacgaaggtatgtcgatt
atcgaacgtgaccgcgctgccgcctggtttgccgaagaagacaccggcgcacaggtactg
ctgtgctcagaaatcggttctgaaggacgtaacttccagttcgccagccacatggtaatg
tttgacctgccattcaacccggatctgctggagcagcgtattggtcgtctggatcgtatc
ggtcaggcgcacgatattcagatccatgtgccttatctggaaaaaactgctcagtcggtg
ctggtgcgctggtatcacgaaggtctggatgcattcgagcacacctgcccgaccggacgc
actatttacgatagcgtctacaacgatctgattaactatctggcttcaccggatcaaacc
gaaggctttgacgatctgatcaaaaactgccgcgagcaacatgaagcgctgaaagcacaa
ctggaacaggggcgtgatcgcctgctggaaatccactccaacggtggcgaaaaagcccag
gcactggcagaaagcattgaagagcaggatgacgataccaacctgatcgccttcgccatg
aacctgttcgatattatcggtatcaatcaggacgatcgcggcgacaacatgatcgtgctg
accccgtccgatcatatgctggtgccggacttccctggcctgtcggaagatggcatcacc
atcacctttgatcgtgaagtggcgctggcgcgtgaagatgctcagtttattacctgggaa
catccgctgatccgcaacggtctggatctgattctttctggcgataccggtagcagcacg
atttcactgttaaaaaacaaagcgttgccggtaggtacgctgttggtggaactgatttac
gtggtcgaagcccaggcgccgaagcagttgcagctcaaccgcttcctgccaccgacgccg
gtacgtatgctgctggataaaaacggcaacaacctggcggcccaggtggagtttgaaacc
tttaaccgccagcttaacgcggttaaccgtcacaccggcagcaaactggttaacgccgtg
cagcaggatgttcacgctatccttcagctgggtgaagcgcagatcgagaaatctgcccgt
gcattgattgatgccgcacgtaacgaagccgacgaaaaactgtctgccgagctgtctcgt
ctggaagcgctgcgcgcagtgaacccgaacattcgtgacgacgaactgaccgccattgag
agcaaccgtcagcaggtaatggaaagcctggatcaggcaggctggcgtctggatgccctg
cgtttgatcgttgtaacgcatcagtaa
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