Eriocheir sinensis (Chinese mitten crab): 126981199
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Entry
126981199 CDS
T08870
Name
(RefSeq) DNA mismatch repair protein Msh6-like isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126981199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esn03400
]
126981199
DNA repair and recombination proteins [BR:
esn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
126981199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
126981199
NCBI-ProteinID:
XP_050687956
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Position
47:214366..249412
Genome browser
AA seq
1299 aa
AA seq
DB search
MHKQPSIASFFSKSPSSCKKAVQESPRGKLKLKGNEVTALDMVWAKLEGHPWWPALVCCS
PGEDSFMRGNLVHVQFFDKPPTRGWVKDGLIKPYGPAISTGVPSYRDATWIEAVREAGEA
EQLPKEDRNLLLVEMLPSDDDMMEDDDGEDEGESDKSKENVAVNGQQNGRGKAVAGAAKG
GEPKTKRRRIVLHSDSESEDDYKPEKDEAARESDDSVSSGVDEAQMSGPETESEVDSPVK
QQPQIKRRKSEPLKSRNLNSSLSSSPRTSTTTTNTTTTTTPAKVSSAVKSKLAMFAAKEA
PAPKEEGSEEWPFLKEPWLKPENVTDRQRRRPDHPEYDPRTLYVPESFMAQQTPGMRQWW
ELKSRHYDTVLFFKMGKFYELFHMDALLGVQELGLIMMKGEKAHSGFPEVAYSRYSSALI
EKGYKVARIEQTETPEMMEKRCKKIARPTKFDRVVRREVCQKSSRGTMVYGIVDGDEREA
ATAHLLALAERPARGSGEVSEYGVAFVDTSIGTFHVGQFVDDCHASRLRTLLAHYPVAQV
LLERGRVGAKTRVMVNALVPANLREVLVPEKEFWTAAKTLSFLAEGPYFRAEGQDDAQWP
QVLKDMMDEGDSLGKTAQEDSELALSALGALTWYLMDCRLEEQLLTRRMFERYAPPDTVA
GDEAAAASATAIPAFIANRHHMVLDGTTLHNLEVFRNSNGGTEGTLVERLDHCSTPFGKR
LLRNWICAPLCNPAAIRNRLDAIADLRSNPDLVEEVTAALKTLPDLERMLAKVHTHGLHR
QSSHPEVRAIYYEETKYNKKKVEGFLSALTGFSTCIEIVKMFKGVRGSLSSSLLRGCVAT
TEEGGNFPLLAEALKFFDGAFDHAEAQREGKIIPHRGVDAEYDEALERLDSTKRSLADYL
KEQCKYFGTKVVFWGNDKKRYQLEVPEHACRRAGDEYELISQRKGYKRYWTTATRELLEE
MIAAEEQRNTSLNDIARRIFNQFDKHQKQWEAALQCMAALDVLCSLTHFSREAETVQPEV
LSPEAGGQPFLEIRDGLHPCLLTSMAGEFIPNDVVVGGPADDAHRPLVLITGPNMGGKST
LMRQTALICLLAQLGSYVPAASCRLTPVDRVFTRVGASDRIMTGESTFYVELAETSSILQ
HATRHSLVLVDELGRGTATYDGTAIASGVVDALARRGCRTLFSTHYHALVDHFAEVPNIS
CGHMACMVEGEDSNDPSQETITFLYKFTEGSCPKSYGFNVARLAGLPECVIRRARQKAKE
LERATLKKQAFSRVMAALGDRPGVLKDVIRESFKSLRVE
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagcagccttccatcgcctcgttcttcagcaagtcaccgtcctcgtgcaagaag
gccgtgcaggagtcgccgcgggggaagctgaaactgaagggaaatgaggtgacggcgctg
gacatggtgtgggccaagctggagggtcacccgtggtggccggcgctggtgtgctgcagc
cccggcgaggactccttcatgcgcggcaaccttgtccatgtacagttctttgacaagcca
cccacacgaggctgggtcaaggatgggctgatcaaaccgtacgggccggcaatatcgact
ggggttccttcctaccgcgacgccacgtggatagaggcggtgagggaggcgggggaggcg
gagcagctgcccaaggaggaccgcaacctgctgctggtggagatgctgccctcggacgac
gacatgatggaggacgatgacggggaggacgagggggagagcgacaagagcaaggagaac
gtggcggtcaacgggcagcagaatggccggggcaaggcggtggcgggggcggccaagggg
ggggagcctaagaccaagcggcggaggatcgtactccactctgacagcgagtccgaggat
gactacaagcctgagaaggatgaggctgcccgggagagcgatgactcggtgagctccggc
gtggacgaggcgcaaatgtccggcccagagacagaatcggaggtggactcgcccgtcaag
cagcaaccacaaatcaagcgccggaagtcagaaccgctcaagtctcggaacctcaactcc
tccctctcctcatcaccacgcacctccaccaccaccaccaacaccaccaccaccaccact
ccggccaaggtgtccagcgctgtcaagtccaagctggccatgttcgcagccaaggaggcg
ccggcccccaaggaggaggggtccgaggagtggccgttcctgaaggagccgtggctgaag
ccggagaacgtcaccgaccggcagcggcggcgacctgaccacccagagtatgaccccagg
acactatatgtccccgagtccttcatggcccagcagacacctggcatgcgccagtggtgg
gagctcaagtcccgccactacgacacggtgctgttcttcaagatgggcaagttctacgag
ctgttccacatggacgcactgctgggggtgcaggagctgggcctcatcatgatgaagggg
gagaaggctcacagtgggttccccgaggttgcgtacagtcgctactcctcggcgctcatc
gagaagggctacaaggtggcgcgcattgagcagaccgagaccccggagatgatggagaag
cgatgcaagaagattgcccggccgaccaagtttgaccgtgtggtgcgccgtgaggtgtgc
cagaagagcagtcgcggcaccatggtgtacggcattgtggacggtgacgaacgcgaggcc
gccaccgcccacctcctggccctagccgagcggccggcgcgtggcagcggtgaggtgagt
gagtacggcgtggcgttcgtggacaccagcatcggcaccttccatgtgggccagtttgtg
gacgactgccacgcctcacgcctccgcaccctgctggcacactaccccgtggcccaggtg
ctgctggagcgggggcgtgtgggtgccaagacgcgggtgatggtcaacgccctggtgccg
gctaacctgcgggaggtgctggtgccggagaaggagttctggacggccgccaagaccctc
tccttcctggccgagggtccgtacttcagggcggagggccaggacgacgcacagtggccg
caggtgctgaaggacatgatggacgagggtgactctctgggcaagacagcgcaggaggac
agtgagttggcgctgtcagccttgggggccctcacctggtacctcatggactgccgcctg
gaggagcagcttctcacccgacgcatgtttgagcgctacgccccgccggacactgtggcg
ggtgacgaggccgccgccgcatccgccaccgccatcccggccttcatcgccaacaggcat
catatggtcctggacggcaccacactccacaacctggaggtgttccgtaacagcaacggc
ggcaccgaggggaccctagtggagcgcctcgaccactgctccacccccttcggcaagagg
ctgctgcggaactggatctgtgccccgctctgcaacccggcagccatccggaaccgccta
gatgccatcgccgacctgcggagcaacccggacctggtggaggaggtcacggccgccctc
aagaccctgcccgacctggaacgcatgctggccaaggtccacactcacgggctgcatcgc
cagtctagtcatcctgaggtgcgcgccatctactacgaggagacaaagtataacaagaag
aaggttgaaggcttcctctcggcactcacaggcttcagcacatgcatagagattgtcaag
atgttcaaaggcgtgcggggctccctctcgtccagtctgctgcgtgggtgtgtggcaacg
acggaggagggcggcaacttccccctactggctgaggcattgaagttctttgacggcgcc
ttcgaccacgcggaggcccagcgggagggcaagatcattccgcaccggggcgtggatgcg
gagtacgatgaggcgctggagaggctggactccaccaagaggagcctggcggactacctc
aaggaacagtgcaagtacttcggcaccaaggtggtgttctggggcaatgacaagaagcgt
taccagctggaggtgccggaacatgcgtgtcgccgtgccggggatgagtacgaacttatt
agtcaacgcaaggggtacaagcgctactggaccaccgccacgagggagctgctggaggag
atgattgcggccgaggagcagcgcaacacatccctcaacgacatcgctaggaggatattt
aaccagtttgacaagcaccagaagcagtgggaggcggcccttcagtgcatggctgccctg
gacgtcctctgctccctcacacacttctcccgcgaggccgagacggtgcagcctgaggtg
ttgagtcctgaggcgggcggacagccgttcctggagatccgcgacggcctgcacccctgc
ctgctgacctccatggcgggtgagttcatccccaacgacgtggtggttggcgggccggct
gacgatgcccaccgcccgctggtcctcataaccgggccaaacatgggaggcaagtccacc
ctcatgaggcagaccgccctcatatgtctcctggcgcagctgggctcctacgtaccagcc
gcctcctgccgcctcaccccagtggaccgtgtgttcacccgcgtgggtgcctcggaccgc
atcatgacgggggagtccaccttctatgtggagctagcagagacctcgtccattctgcag
catgccacccgccactccctggtgctggtggatgagctgggtcgaggcacagccacctac
gacggcacggccattgcctccggggtggtggacgccctggctcgccgtggctgccggacg
ctgttctctacgcactaccacgccctcgtcgaccacttcgccgaggtgccgaacatctcc
tgcggacacatggcctgcatggtggagggtgaggacagcaacgacccctcccaggagacc
atcaccttcctctacaagttcactgaggggtcatgtcccaagtcctatgggttcaacgtg
gcacggttggccggtctgcctgagtgtgtcatccgccgggcgcgccagaaggccaaggag
ctggagcgggccaccctgaagaagcaggctttctctagggtcatggccgccctgggagat
cggccaggggtgctgaaagatgtcataagggagagttttaaatccctgcgtgtggagtaa
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