Eriocheir sinensis (Chinese mitten crab): 126981718
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Entry
126981718 CDS
T08870
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
esn03009
]
126981718
03012 Translation factors [BR:
esn03012
]
126981718
Enzymes [BR:
esn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126981718
5.6.2.5 RNA 5'-3' helicase
126981718
Ribosome biogenesis [BR:
esn03009
]
Eukaryotic type
Other ribosome biogenesis factors
126981718
Translation factors [BR:
esn03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126981718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
R3H
SMUBP-2_HCS1_1B
AAA_30
AAA_19
zf-AN1
Viral_helicase1
DEAD
ResIII
AAA_22
AAA_16
Flavi_DEAD
nSTAND3
Helicase_RecD
AAA
UvrD_C_2
UvrD-helicase
DnaB_C
ABC_tran
NPHP3_N
PhoH
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
126981718
NCBI-ProteinID:
XP_050689114
LinkDB
All DBs
Position
49:complement(4441401..4463729)
Genome browser
AA seq
1155 aa
AA seq
DB search
MGEQRGTRAPSKSPLSRHEWVALHLALLEEERKAEVQAAQTQVEGLPVKVLEARGVLLGR
LVLSERSTGLYGRPVVTLTPRLKDSTLPANSFSAGDIVGVCEGPNQVATGVVVEVGERRV
VVAGDEEGREDLDGLEDDATLTLRKLASEVTYRRVKSGLVELGKEVSSSASHLIQVLFRE
APPHSPAPALPPKLISSSGELQLFNGRLDASQREAVEFALKRSDLAVIHGPPGTGKTTTL
VEVIRQHVKLGAKALVCAPSNLAVDNLVERLAAAKVRLVRLGHPARVTPLTQRHTLDAIL
HNSEEWQVLGDIRTEMEGELGRLRKSRGGDQRRHIRTNIKSLRKELREKEMRLVKQVLLG
SEVILATLTSSSSDGPLRHLPPQHLDLVVIDECSQSTEASCYLSLLRAPKLVLAGDHCQL
PPTIVSAEAAAKGLDLSLMERVIGECGEEVVRMLTQQYRMHAAIMDWSSAAMYEGRLSAH
PSVTSHLLSHLPGVTPTEDTENVAVVVDTAGCECRELDTPDAQSKANPGEAVLVACHIKA
LVSAGVPEASIAVITPYNLQVEMVRGLLASEYPRVEVRSVDGFQGREKEAVVVSLVRSNK
QGTVGFLSEDRRLNVAVTRARRHLALIGDSETAGRHPFIRTLFDHLTRHGLVKTAHEFQQ
ELDNTEVRMPECLSWAQKSDKRAPVTAKKDTKDSTSKKPKQQQQKQQKQPSEEDNQKRKQ
EYLDIVKSFLASPNSTYSFPPNLNSFERRLIHQICEELDLDHSSEGDGKERHIVIKKRPS
NKLITEQEGKEEQEVEEKEECLTAEQEERARVEAMIAEFLESPEESLRLPSKMSAFERSV
VHGVCDELGLMHQSEGKGKRRHIVIQKQNKSIQEGTKEMEDKKTADNERSLHIKTKGGDR
NSIRDEEADIGPLLPHSTETVPSLPEDKHSNTQGGAIPKRNLENNVTAIKKVRTRFIDGK
YVEVEEGVNAAPQTKTCPVCGKDVPLPNYGLHSVQCERRSRETQQQQETSARSNKENVKK
KSSKKGSGKSNKKQKEEEEEEDFDSLINKFVKDNNTCSEPRCKTPTSVIFQLCPFCRRTF
CLAHHMAEVHGCGPLARQHARTVISREGVLYPGSGVPSKKPSEDKRKQLERKLAKKMDNF
NSKRAAKKPGKEEEK
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagcagaggggcactagggcaccctccaaaagtccactgagtcgccatgagtgg
gtggctctgcacttggctttgctggaggaggagaggaaggctgaggtacaggctgcccag
acacaggttgaggggctgccagtcaaagtattggaggctaggggtgtcttgctcgggcgg
ctggtgttgtccgagcgttccacaggcctctatggaaggccagtcgttacactcacacca
agactgaaggactcaactctgccagctaatagtttctctgccggtgacatcgtgggagtg
tgtgaagggccaaaccaggtggcaacgggggtagtggtggaagttggggagcggcgtgtt
gtggtggcaggagatgaggaggggcgggaggacctggatggcctggaggacgatgccacc
ttgaccttacggaaactggccagtgaggtgacctatcggcgggtgaagtcaggcctggtg
gagctgggtaaggaggtgagcagcagcgcctcacacctcatccaggtactgtttcgcgag
gctccaccccactcccccgcacccgccctgccccccaagctgatctcctcgagtggcgaa
ttgcagttgtttaatggccgtctggatgcctctcagcgcgaggctgtggagtttgccctg
aagcggagtgacttagcggtgatccacgggccaccagggacaggcaaaaccacaaccttg
gtggaggtgatacggcagcatgtcaaactgggagccaaggcattggtgtgtgcgccatcc
aacctggccgtggacaacctggtggagcggttggctgcggcaaaggtgcggctcgtgcga
ctgggccaccctgcacgcgtcacacccctcacacagcgacacaccctcgacgccatactg
cataacagcgaggagtggcaggtgctcggggacatacgcacggagatggagggggagctg
gggaggctgaggaagagccgagggggtgaccagcgccggcacatcaggaccaacatcaag
agtctgcggaaggagctcagggaaaaggagatgaggctggtcaagcaggtgttgctgggc
agcgaggtgatcctggcgaccctgaccagcagcagcagcgacgggcccctcagacacctg
ccgccccaacacctggacctggtggtgattgacgagtgttcccagtcaacggaagcatcg
tgttatctctcgttgctgcgcgcccccaagctggtcctggcgggtgatcattgccagctg
ccgcccaccatagtgtctgctgaggctgctgctaagggcctggacctcagcctgatggag
agagtgataggggagtgtggggaggaggtggtacgcatgctcacccagcagtaccgcatg
cacgctgccatcatggattggtcgtcagctgccatgtacgaggggcggctgtcagcacac
ccctctgtcacatcccatctgttatcgcaccttcctggtgtcactcccaccgaagacaca
gaaaacgtcgctgtggtggtggacacggctgggtgtgagtgtcgggagctggacacgcct
gacgcacagagcaaggccaacccgggcgaggcggtgctggtggcctgtcacatcaaggca
ctggtgtccgctggtgtccccgaggcctctattgctgtcatcaccccctataacctgcaa
gtggagatggttcgcggtctgctggcatcagaataccctagagttgaggtgcggtctgtg
gatggctttcagggcagggagaaggaggcggtggtggtgtccctcgtccgttccaacaag
caaggcactgttgggttcctgagcgaggacaggagactcaacgtggcagtgactcgcgct
cgacggcacttggcactcattggggactccgagacagccggccgacaccccttcatccgc
accttgtttgaccacctcacccgccacggcctggtgaagacggctcatgagttccagcaa
gaactggacaacactgaggtacggatgccagaatgtctcagttgggcccaaaaaagcgat
aaaagagcaccagttaccgccaagaaagacacaaaggactccaccagcaagaagcccaaa
cagcaacaacaaaagcagcagaaacagccgagtgaggaagataaccagaagaggaaacag
gagtacctagacatcgttaagtcattcctcgcctcaccaaactcgacatatagcttccca
ccgaatctaaactctttcgagaggcgactgatccaccagatatgcgaggaacttgatctt
gaccacagcagcgaaggagatgggaaagaacggcatattgtaataaaaaaacgcccctcc
aacaaactgataacagagcaggagggtaaggaagagcaggaggtagaggaaaaggaagag
tgtttgacagcagagcaagaagagagagcaagagttgaggcgatgatagcagagttcctg
gagtcaccggaggagagtctgaggctgccgtccaagatgagtgcatttgagaggagcgtg
gtgcatggggtgtgcgatgagctgggactgatgcaccagagcgaggggaaagggaagagg
cgtcacattgtcatacaaaaacaaaacaaaagcattcaggaaggcaccaaggaaatggaa
gataaaaaaactgcagataacgaaaggtcactgcacataaaaactaaaggaggcgatagg
aattccataagggacgaagaagcagacattgggccacttttaccacatagcacagaaaca
gtaccatcattaccagaagacaaacacagtaacacacagggaggcgcaatacccaaaaga
aatctagagaacaatgtaactgccataaagaaagttagaacgcgctttatagatggaaaa
tatgtggaagtggaggaaggggtgaatgcagcaccgcagactaagacttgtccagtgtgt
gggaaggatgtgccgctgccaaattacggcctccacagcgtccagtgtgagcgccggagc
agagagacgcagcagcagcaggagaccagtgcaagaagtaacaaggagaatgtgaaaaag
aagagtagcaaaaagggaagtggaaagagcaacaagaagcagaaggaggaggaagaggaa
gaagattttgacagcttaatcaacaagtttgtcaaggacaacaacacgtgctccgagcca
cgctgcaagacccccacttccgtcatcttccagctctgccccttctgccgccgcaccttc
tgtctggcacaccatatggctgaggtgcatggctgcggccccctcgcacgccagcacgct
agaacagttatctcaagggagggagtactgtatcccggcagtggggtgccctcaaagaaa
ccttctgaagataagaggaagcagctggagaggaaattagcaaagaagatggacaacttc
aacagtaagagagcagcaaagaaaccagggaaggaggaggaaaaataa
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