Eriocheir sinensis (Chinese mitten crab): 126982185
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Entry
126982185 CDS
T08870
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126982185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esn03041
]
126982185
Enzymes [BR:
esn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126982185
Spliceosome [BR:
esn03041
]
Complex A
U2 snRNP components
U2 related factors
126982185
Complex B
126982185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-GeneID:
126982185
NCBI-ProteinID:
XP_050689990
LinkDB
All DBs
Position
4:complement(11433140..11527440)
Genome browser
AA seq
1036 aa
AA seq
DB search
MTRDSRRRRSRTRSRSLERRRSRERDRDRGRSRRSRSRDRDRDRDRDRDRDRDRHRSRSR
DRRRSRSRDRRSRSRSRDRDRDRDRKRSRSRSRDRDRKRSRSRSRDRDRDRDKDRDRKRS
KKSRTPSPPKVKLLLNPPKPQEPVPVAPKEEEEVPLDFDPSKVDKEETEKRLEAEMQKRR
ERIEKWRAEKKKRELEAAKKEAERGTLGANVPKVSIKAWSLEDDEEEEEGENKEGNGEAD
EEDEVDPLDAFMSGIQEEVRKISRVDIRGGVKKGTKITAAGTESGGPKKPVIIMGVAKKV
SAKKKGELMEQNQDALEYSSEEEGEDLKDTMASINSKGKKELGKVDHTVIEYVPFRKDFY
VEVPEIANMTKEEVDAYRAELEGIKVKGQGCPKPIRTWAQCGVSKRILDVLKKNNYEKPT
PIQVQAIPAIMKGRDVIGIAKTGSGKTLAFLLPMFRHVVDQPPLEDTDGPIALIMTPTRE
LCMQIGKECKKFAKNNLRVCCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANGGRV
TNLRRVTYVVLDEADRMFDLGFEPQVMRIVDNVQPSRQTVMFSATFPRQVEALAKKILMK
PIEITVMVLYVFYMFCGWLNYINLNNLSKNICWHLMDLLSHSYRALVLHGGVDQIDRDST
MMDFKAGRVPILVATSVAARGLDVKQLILVVNFDAPNHYEDYVHRCGRTGRAGNKGWAYT
FLTPDQPRYAAEVVRAMEISEITVPPDLQKLFDEYKQKLEGEGKKVKTGGGFHGKGYKFD
ESEANFASEKKKFEKAALGLADSDDEDIEQDIDQQIESMLNTKRTVKEIKAPEVSSNSDS
LAGMPFGGPSASDKLELARRLAQRINLQHNIGKEAKGASQQAAEFILKGGAAMQPTISAK
TVAEQMAQKLNNKLNYQPRDDQEEEEETAEETHHKYEEELEINDFPQQARWRVTSKEALA
QISEYSEAGITVRGTFCPPGKNPPEGERKLFLAIESTSELAVSKAKAEIIRLIREELVKL
RTSAGPAKAQGRYKVL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgggacagcagacgccgaaggtcacggacacggtctaggagcctagagcgtcgg
cgctccagggagagagaccgtgacagaggcagatcacgacggtcccgctccagagatcgt
gacagggaccgtgaccgtgaccgcgaccgtgaccgtgaccggcacaggtctagaagtagg
gaccgcagaaggtcaaggtcacgtgacaggcgttccagatcaaggtcacgagacagagac
agggacagagacaggaagaggagcaggagcaggtcaagggacagagacagaaaaaggagt
cgaagtaggtcaagggacagggacagagacagagacaaagacagagacagaaaaagaagc
aagaagagccgcactccatcccctcccaaggtgaagctccttctcaaccctccgaagcct
caagagcccgtccccgtagcacccaaggaagaagaggaggtgccgctggactttgaccca
tcaaaagtagataaggaagaaacagaaaaacgccttgaagctgaaatgcaaaagaggagg
gaaaggattgagaaatggcgagctgagaaaaagaagagggagttggaggcagcaaagaag
gaggcagagagagggactctgggagccaatgttcctaaagtgtccattaaggcatggagt
cttgaggatgatgaagaagaggaagagggagaaaacaaggaaggaaatggggaggcagat
gaggaggatgaagttgatcccctcgatgccttcatgtcaggtatccaagaagaagttcgg
aagatcagtcgtgtagacattcgaggaggagtgaagaaaggcacaaagatcactgcagca
ggtacagagtctggggggcctaagaagccagtgatcatcatgggtgtggcaaagaaggtg
agtgccaagaagaagggggagctgatggagcagaaccaggatgccctcgaatactcgtct
gaggaggagggcgaggacctgaaggacaccatggccagcatcaactctaagggcaagaag
gagcttgggaaggtggaccacacagtcattgagtatgtaccatttaggaaggacttttat
gtggaggtgccggagattgccaacatgaccaaggaggaagttgatgcataccgagctgaa
cttgaaggaatcaaggttaaaggtcaaggatgccccaaacccatcaggacttgggctcag
tgtggagtcagcaaaagaatattagatgtcctcaaaaagaacaactatgagaagccgaca
cccatccaagtgcaggccatcccagccatcatgaaaggtagagatgtcataggcattgcc
aagacaggctcagggaagacgttagccttcctgctgccaatgttccgacatgtagtggac
cagccacccctggaggacacagacggacctattgccctcatcatgacccccaccagagag
ctgtgcatgcaaattggcaaggaatgcaagaaatttgctaagaacaacctgagggtgtgc
tgtgtgtatggtggcacaggaatatcagagcaaatagcagagttgaagcgaggagcagaa
atcatcgtgtgcactccaggtcgaatgattgacatgctggctgccaacggagggcgggtg
accaacctgcggcgagtgacctacgtggtgctcgacgaggctgatcgcatgtttgacctg
ggttttgaacctcaggttatgagaatagtagacaacgttcagccatcacggcaaactgtg
atgttctcagctacattcccaagacaagtagaagctctggctaagaaaattttaatgaaa
cctattgaaataacggtaatggtcttatatgtgttttatatgttctgtggatggttaaac
tatattaatcttaataatctttccaaaaatatttgttggcatttaatggacctgctcagt
cattcctaccgggcactggtgctccacggaggggtggaccagattgaccgcgacagcacc
atgatggacttcaaggctggtcgcgtgcccatcttggtggcgacatctgtagcagccaga
ggcctggatgttaagcagctgattttagttgtaaactttgatgctcccaatcactatgaa
gactatgtacataggtgtggacgtacaggccgtgctggaaacaaaggctgggcatacacc
tttctcacccctgatcagcctcgctatgctgctgaagtcgtccgagctatggagatctct
gagatcactgtaccaccagacttgcagaaactttttgatgaatacaagcaaaagctggaa
ggagaaggcaagaaagttaaaacaggtggtggttttcatggtaagggttataagtttgat
gagtctgaagctaactttgcatcagaaaagaagaagttcgagaaggctgcacttggattg
gcagactctgatgatgaagatattgagcaagacattgaccagcagatagagagtatgctc
aacacaaagaggactgtcaaggaaatcaaggcccctgaagtgtcatcaaactcagatagt
ttagctggcatgcccttcggtggtccctcagcctcagacaagttagaactggcacgcaga
ctggctcagcgcatcaatcttcagcacaatattggcaaggaggcaaagggtgccagtcag
caggctgctgagtttatcctaaagggaggagctgctatgcaacccactatatcagccaaa
actgttgcagaacagatggcccagaaactcaacaataaactgaactatcagccacgtgat
gaccaggaggaagaggaggagacagcagaagaaactcatcataagtatgaagaagaactt
gaaattaatgacttccctcagcaggcaaggtggcgagttaccagcaaggaagccttggca
cagatctcggaatattctgaagcaggaatcacagtgcgaggcacattctgtcctccgggt
aagaatccacccgagggtgagcggaagctgttcctggctattgaatctacgtctgagctg
gctgtgtcaaaggcaaaggctgagatcattcggttaataagagaagaactagtgaagctc
cgtaccagtgctggacctgccaaagctcagggacggtacaaggttctgtaa
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