Eriocheir sinensis (Chinese mitten crab): 126982191
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Entry
126982191 CDS
T08870
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126982191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esn03019
]
126982191
Enzymes [BR:
esn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
126982191
Messenger RNA biogenesis [BR:
esn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126982191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
126982191
NCBI-ProteinID:
XP_050689995
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All DBs
Position
50:1957466..1974160
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AA seq
540 aa
AA seq
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MVDVTNKTFEAVLPQIISEVRAATFLALDAEFTGLLANAAYKADLFDDGPRRYRKLCASM
HHFSITQLGLAVFTGEVDSNSYSVSTYNFYLRPHSCASSDPIIACQTSSLEFLQRFNFDF
NKWIYEGVPYMNSEEEENLQTELSALFKGTKPVLLSFELTDHLRGVGEWVAMGCEGGTHT
VAGVLDTHSQAMLLAAIHNTFAGLWATLQDGQIVVRSVSSDERERLDAEDPGRTQLVSAL
VERNTGFTRLFRHLVELRKPIVLHNCILDLMLMYKQFHKRLPSSYSTFKSEVHALFPLLY
DTKFVAEEMRSKYRDDAIVSKILHKTSLGELHTALRGDLPVLYVPRLHHRPPDNKYSQES
VMLHEAGYDAILTGTCFVRMAQLCAMISLPVTAPHRPLSPREHLFTLKEYANKIQVPRSA
VSCMVLSGEDRPSKRPPWLLVEGQGRGVRVTPGLVSATLAKYGRLDVQPLNNKSVLVATT
SWNCLTNILSSLSSETSLQAKIYSRPRLSPLMHTFILSGAVLSTGLGAWLVYKSFKKSSS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggtggacgtgaccaacaagacctttgaggccgtgctgccgcagatcatctctgaggtc
agggccgccaccttcctggccctggacgcagagttcaccggcctcctcgccaacgctgcc
tacaaggcagacctgtttgatgatggtccgcggcggtacaggaagctgtgcgccagcatg
caccacttctccatcacgcagcttggcctggcggtgttcacgggtgaggtggacagcaac
agctacagcgtgtccacctacaacttctacctgcggccccactcctgtgcctccagcgac
cccatcatcgcctgccagacctccagcctcgagttcctgcagcggtttaactttgacttc
aacaagtggatctacgaaggcgtcccgtacatgaactccgaggaagaggagaaccttcag
acggagctgtcggcactcttcaagggaaccaaaccagtcctcttgtcctttgagttgacc
gatcacctgaggggcgtgggggagtgggtggcgatggggtgtgagggcggcacgcacacg
gtcgccggcgtactggacacacactcccaggccatgttgctcgctgccatccacaacacc
ttcgctgggctctgggcgacgctgcaggatggccagattgtggtgaggtcagtatccagc
gacgagagagagaggcttgacgcggaggacccagggcggacacagctggtctcggcactt
gtggagaggaacacgggttttacgaggctgttccgacacctggtggagctcaggaaaccc
atcgtcctgcataactgtatcctggaccttatgctgatgtacaaacagttccacaagagg
ctgccgagttcctacagcaccttcaagtctgaggttcatgcacttttccctctcctctac
gacaccaagttcgtggccgaggagatgcgatccaagtacagggacgacgccattgtgagc
aaaatcctccacaagacgagcctcggagagcttcacaccgccctcagaggagacttgccg
gtgctgtatgtccctcgcctgcaccaccgcccgcccgacaacaagtactcgcaggagagc
gtgatgctgcatgaggcgggctatgatgctatcctgactgggacttgcttcgtgcgcatg
gcccaactctgcgccatgataagcctgcccgtaacggctccccatcggcccctcagccct
cgggagcacctcttcaccctcaaggagtacgccaacaagatccaggtgccgaggtcagcc
gtctcctgcatggttctcagcggggaggatcggcccagcaagcgtcctccgtggctgctg
gtggaggggcagggcaggggagtgagggtgacgccggggctggtctcggcaacgctggct
aagtacgggcgcttggacgtacagccgctcaataataagtctgtgttggtcgccactacg
tcctggaactgcctcaccaacatcctgtccagcctgtcctccgagacttccctccaggcc
aagatatacagccggcccagactctcgcccctcatgcacaccttcatactgtccggtgct
gtgctgtcaacgggactcggtgcgtggctagtgtacaagtccttcaagaagtcctcctca
tga
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