KEGG   Eriocheir sinensis (Chinese mitten crab): 126982332
Entry
126982332         CDS       T08870                                 
Name
(RefSeq) THO complex subunit 3-like
  KO
K12880  THO complex subunit 3
Organism
esn  Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03013  Nucleocytoplasmic transport
esn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:esn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126982332
  09122 Translation
   03013 Nucleocytoplasmic transport
    126982332
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:esn03019]
    126982332
   03041 Spliceosome [BR:esn03041]
    126982332
Messenger RNA biogenesis [BR:esn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     126982332
Spliceosome [BR:esn03041]
 Complex C
  Other components
   EJC/TREX
    126982332
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    126982332
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WDR55 EIF3I WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd eIF2A Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st DSE1_N Beta-prop_EML RMC1_N Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st WDR90_beta-prop_4th Tricorn_2nd NBCH_WD40 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_HPS5 PAC11 TRM82_WD CFAP251_N PROPPIN ASA1 Beta-prop_WDR11_1st Peptidase_S9_N Beta-prop_SCAP Beta-prop_VPS8 WD40_RFWD3 Beta-prop_ELP1_1st Beta-prop_NUP159_NUP214 Cytochrom_D1 PD40 KNTC1_N Beta-prop_RIG_1st DPPIV_N WD_LRWD1 DUF5121
Other DBs
NCBI-GeneID: 126982332
NCBI-ProteinID: XP_050690292
LinkDB
Position
50:6317452..6330343
AA seq 326 aa
MGTSYLEEMRSYFETHNKQKEYVGHNSKVHTIGWNADGRRLASGSYDKCVTIFVFDGHRD
TLRKDYTYKGHGDSVDQLCWHPTHSEQLTSASGDKTVRIWDTRTHKCSATITTKGENINI
TWSPDGHTIAVGNKEDLVSFIDVRSQKIRHEQQFKFEVNELSWNNTNDLFYLTNAQSGQG
YIHIYNYPEMELAHSIHAHPGNCICIKFEPQGRYFATGSADALVSIWDVQELYCKRTLPR
LEWPVRTLSFSSDGQLLASGSEDQAIDVAHVETGEQVAHISVAYPTFTLEWHPKHFLLAY
ACDDKDDRDRDRDAGTVKLWGLGDRT
NT seq 981 nt   +upstreamnt  +downstreamnt
atggggacgtcttacctggaggagatgcggagctactttgagacacacaacaagcagaag
gagtacgtgggccacaactctaaggtccacaccatcggctggaacgctgacggccgccgc
ctcgcctccggctcctacgacaagtgtgtgaccatctttgtgttcgacggacatcgcgac
actctgcggaaggactacacctacaagggacatggcgacagtgtggaccagttgtgttgg
catcccacacactccgagcagctcacttcggccagcggggacaagacagtgcggatatgg
gacacacgcacccacaagtgttccgcaaccattaccacgaaaggcgagaacatcaacatc
acgtggtcaccggacggccacaccatcgccgtgggcaacaaggaggacctggtctccttc
atcgacgtccgcagtcagaagatccgtcacgagcagcagttcaagtttgaggtcaacgag
ctctcctggaacaacaccaatgacctcttctacctcaccaacgcgcagagtggccagggc
tacatacacatatacaattaccccgagatggagctggcccactccatccacgcccacccc
gggaactgcatctgcatcaagtttgagccgcagggacgctacttcgccacgggctccgcc
gatgcgctggtctccatctgggacgtgcaggagctgtactgcaaacgaacactgcccagg
ctggagtggccggttcggactctgagtttttcgagcgacgggcagctcctggcgtctggg
agtgaggaccaggctattgacgtggcccatgtggagacgggggagcaggtcgcccatatc
agcgtggcctacccgaccttcacgctggaatggcaccccaaacacttcctgctggcctat
gcgtgtgacgacaaagacgaccgcgaccgtgaccgcgacgctggcacagtgaagctctgg
gggctgggcgaccgtacatag

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