KEGG   Eriocheir sinensis (Chinese mitten crab): 126983002
Entry
126983002         CDS       T08870                                 
Name
(RefSeq) roquin-1-like isoform X1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
esn  Eriocheir sinensis (Chinese mitten crab)
Brite
KEGG Orthology (KO) [BR:esn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:esn03000]
    126983002
   04121 Ubiquitin system [BR:esn04121]
    126983002
Transcription factors [BR:esn03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    126983002
Ubiquitin system [BR:esn04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    126983002
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-CCCH zf-C3HC4 zf-CCCH_4 zf-C3HC4_4 Prok-RING_4 zf-C3HC4_2 Vesi_VP2 zf-CCCH_UNK zf_CCCH_4
Other DBs
NCBI-GeneID: 126983002
NCBI-ProteinID: XP_050691356
LinkDB
Position
52:complement(6919621..6939732)
AA seq 973 aa
MPIQAPQWTEFLSCPICCHEFDSGQRGPISLGCGHTVCRACLAKLQRNQCPYDQTVMRLE
LDQLPVNGALLSLVGAGSTVEEGELPPPPPVPPTHTPNYFMAVKCIKELALFLKPFSGTG
TNGSTSLLSRPMQRKLVTLINCQLVEDEGRARAVRAARSLGERTVTELILQHQNHQQLSA
NLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFPQASKTS
IGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPD
QWSSLLYGDTAHKSHMQSIIDKLQTPQSFGQSVQELVIALQRTGDPGQLSSLRPQLELLA
ALDPAPDAPPPGWKPCAEAMEAVRAVVTGLVHFIQHHGNRKLPDAHHPHNAKYKTSMCRD
LTQRSGCPRGNNCTFAHSEEELEKYRNRSRKHGKGLAPPLTAPAIKTSAQHLTVPAAPLT
PHPPTGVEAKNGEHAPPTGPVPKATTVEEMLQVGDIPPPAAPLSYETHKFVHLPAHTQSV
PVMPAPTPTPAIIQPALAPAPFHPTPVAEYTYSSFHCQPPVFAQAAPPQQPLPSAPTAAV
FPGQATAIVPDLYGGNPPTMLLNTAPVYNVTGHTNEYCIPIANTKPTNSGLHPLVSCWPD
TSCATFCVTTSPSTSSSLTPAASIMATKSMEELKERKEAIMNQLETIVGKEATHQMATQI
ANGEELSKPQEFTSTYSIWTSGADFYIAPKGLEKPYEPVTGYRTFAARKEEGKGGKDDFI
PFDPPLVSRFGPISRMSRTVIQPANPIQSSVSSATETTTTPTVRRPVPAISPMPQMLYQP
GGYTVGVMTCIPASLEHMNTMGHGIVDPVFTQLDSSGGLRAVSADAAQQECLRQQFAATR
EGLDAIVLDEKRMVELHEVRLKEELSLVMNRIELKRKEMESKAAAAAGSSQDTEKDLGDF
EKNWKFDFEDEKE
NT seq 2922 nt   +upstreamnt  +downstreamnt
atgcccatccaggccccccagtggaccgaattcttgtcgtgtcccatctgctgccatgag
tttgacagtggacagcgcggccccatcagcctcgggtgcggccacaccgtgtgccgcgcc
tgcttggccaagctgcagcgcaaccagtgtccttatgaccagactgtaatgcgactggaa
ctggaccagcttccagtcaatggagcgctgttgtccctggtgggggctggaagcaccgtg
gaggagggggaactgccccctcctcccccggtgcccccaacccacacccccaactacttc
atggcagtcaagtgcattaaggagctggcactctttctcaagcccttctctggcacaggc
accaatggctccacctcactcctatcccggccaatgcagagaaagcttgtcacactcatc
aattgccagctggtagaggatgaggggcgagccagggcggtgagggcggcccggtccctg
ggcgaacgaacagtcaccgagctcatcctgcagcaccaaaaccaccagcagctctcagct
aacctgtgggcagcagtgagggccagaggctgtcagtttctaggccctgccatgcaggag
gaggtgctgaagctggtgctgctggcgctggaggatgggtctgcactctccaggaaggtg
ctggtgatgttcgtggtgcagcggctggagcctcacttcccccaagcctccaaaacaagc
atcggacatgttgttcagctactctaccgtgcctcttgcttcaaggtttccaaaagggag
ggcgactcgtccttgatgcaactgaaggaggagttccgcacctacgaggcactgaggcgg
gagcacgacgcccagattgttcagattgccaccgaggctgggctcaggatcgcccccgac
cagtggtcctccctactctacggtgacacagcgcacaagtcacacatgcagtccatcatt
gacaagctacagaccccacagtccttcgggcagtcagtgcaggagctggttattgccctg
cagcgtactggtgaccctggccagctgtcttccctgcggcctcagctggagctgttggca
gcactggacccagcccctgatgcacctccgccagggtggaagccatgtgcggaggccatg
gaagcagtgagggcagtggtgaccggcctggtgcacttcatacagcaccatggaaaccgc
aagctgccagatgctcaccacccacacaatgccaagtacaagaccagcatgtgccgagac
ctcacgcagcgcagcggctgtccacggggcaacaactgcacgtttgcccactccgaggaa
gagttggagaagtaccgcaaccgcagccgcaagcacggtaagggtttggccccgcccctg
acagccccagccatcaagacctcagctcagcatcttacagttcctgcagcacctctcaca
ccacaccctccaactggtgtggaggccaaaaatggggagcacgcgcctcctaccggcccc
gtgcctaaagccaccactgttgaggagatgctccaggttggagacattccacccccagct
gccccactctcttatgaaacccacaagtttgtacaccttccagcccacacccagtccgtg
ccagtgatgcctgctcccacacccacccctgccatcattcagccagcccttgccccagca
cccttccacccaaccccagtggcagaatacacgtacagctccttccactgccaacctcca
gtgtttgcccaggctgcccctccccagcagccccttccctcggcccctacagcagcagtg
tttcctggtcaggcaacagccatcgtgccagacttgtatggcggcaacccccccaccatg
ctgctcaacactgccccggtgtacaatgtgaccggccacacaaatgagtactgcatcccc
atcgccaacacaaagcccaccaactctggccttcaccctctagtttcctgctggcccgac
actagctgtgccaccttctgcgtcaccacctctccttccacctcatcctccctgacacca
gcagcctccatcatggctaccaagtctatggaggagctgaaggagaggaaagaggccatc
atgaaccagctggaaactatcgtgggcaaggaggccactcaccagatggccacacagatt
gccaatggtgaggagctcagcaagccccaggagttcacgtccacctacagcatctggacc
tctggggcagacttctacatagcacccaagggcctcgagaagccctacgagcctgtcact
ggctatcgcacctttgccgccaggaaagaagagggcaagggaggcaaggacgacttcata
ccctttgatccgccgctagtgagccgctttggaccaatctcccgcatgtcccgcaccgtc
atccagccggccaaccccatccagtcctcggtgagcagcgccacagagacaaccaccacc
cccaccgtgcggcgccccgtgccagccatctcacccatgccacagatgctttaccagccg
ggtgggtacacagtaggggtgatgacctgcatccccgcctccctggagcacatgaacacg
atgggccatggcattgtggacccggtcttcactcagctggattcctccggtggcctcaga
gccgtgtcagccgatgcagcccagcaggagtgtttgaggcagcagtttgcagccaccagg
gaaggactggatgccatagtgctggatgagaagagaatggtcgagctgcatgaggtgcgt
ctgaaggaggagctgagcctcgtcatgaacaggattgagttgaagcgcaaggagatggag
agcaaggcggcagcagcggcagggtcctcgcaggatactgagaaggaccttggggacttt
gagaagaactggaaatttgattttgaggatgaaaaggaataa

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