Eriocheir sinensis (Chinese mitten crab): 126983458
Help
Entry
126983458 CDS
T08870
Name
(RefSeq) collagen alpha-1(XVIII) chain-like
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Endostatin
Fz
Collagen_trimer
Laminin_G_3
Mucin
Motif
Other DBs
NCBI-GeneID:
126983458
NCBI-ProteinID:
XP_050692114
LinkDB
All DBs
Position
54:complement(5074577..5190067)
Genome browser
AA seq
1511 aa
AA seq
DB search
MTGAALRLAVVAVAAVTAGWWWNVAADPAFPVSYRTKGNSLPERRESVEEVDLLQAIAVP
FEDPSTQYFVTGFDGFPAFGFKVGASIKHPFRLFLPERLYREFSIQAAVKPDTEEPMFLF
AVTNPLENLVQLGVSLSPSVPGASNLSLFYTDAERHMTSQTIASFLVPQFKGVWTRFAFR
VTAAEVQLWFNCQRYNEVVVHRVPQQLVFDSASTLYIGQAGGIFKGYFEGALQELRIYSS
PDMAQVQCNNHFAYHTSGSGDGRADLPVLEEDSFTFDMEEEEEEDLPLPRLEGSGLDFDG
APPPLPPPPPPRGCDDKHCRAVGMTWACKGMEWEKAVYPNLLGHGPREAEAMAALFWHPL
NSLGCNKEFRFVVCSLLAPPCRPGLHKPLPPCREVCEVGLRQCLPVMYRNLLPWPQNTFT
CTMLPYSHQDSCLRYHQGQVVFPKGLESHCATQGLSEYYDDEFNDSVTSDNHHRILDFED
DEYDESSHLGYHEDPQDFDGDDFGGPTSSRDHLRVFGDGADDGDGALAHSGDHALQDFDV
RCDGDFCDDSDGDDGGSGGYRSSDDDMEGSGRTLTTTPTTTTTTTTTAPTTTTTTTTTTT
PMPKISFVTTTPTTTILPSPSSSSSSSSSRGHQEAGYLVSSGAVNDFLALPGPKGEKGSR
GPRGPPGESIAGPPGRPGPPGPPGPSTRKIPFPPDEENGVDAEVWARRGECACNTTHLVA
AVLAQIPRGPRGPKGVPGRDGVAGTPGTSGRSGPPGERGPQGEKGDKGDRGGTGRRGADG
PQGAKGESGLDGPPGQRGEPGAQGPPGQPGWANHDPQWKPRNMFKLENGMTVAPARPGTP
GAPGVKGEQGALGERGPRGHPGSKGEKGENGSPGEKGDEQKMLILTFYPFSLPFFFLSFI
LSFHLSGLAGEKGSAGRGLPGPPGIPGKMTEEDRAEIFKQLVERLESKNLGSGSHLGEGI
GVWDPSGGLTWVEETDDEELGRGSEGSGGVLYVPYHPKEGRGLRGPPGSPGPRGPQGMEG
IQGLMGPPGDRGPPGQPGMDGLPGPKGDKGEGGTPGRDGTPGPVGPLGAKGERGLPGVSG
QVATLVLPDGSNVTVVKGDKGDRGRRGKRGRRGPQGPPGPTGELGLPGWPGAPGRPGPQG
PPGKGLKGEPGPPGPPGPPGPTPPPGILNGILGSSSSDVAEAREGPPGPVGPSGPSGPPG
PPGPPGAEGPPGKPAPPSENVHGYIPVPGPPGPPGPPGPPGPRGSPGPSTPEQGGPSQGT
PSSPSSQPPNIGQRGGGGFGGIDELRRITGHRGNRGPSGQDGGPLVVPSVVTYTDRASML
KMSDATPVGSLAFLLDEEKMLVRINRGWQHVSLGSVVTPPTTTPAPPTTNPPTTDTTTTP
PSAVGTPSLQVHSLHNNKDGPKEELTKLRLAALNQPYTGDMRGVRGVDYTCYREARRAGL
SGTFRAFLTSRIQNLDSIVRKVDADLPVVNIKGEVLFNTWRGIFSGDGGRFMQRPRIFSF
DGKEVLSSPEW
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcgccgctctcaggctggcggtggtggcggtggcggcggtgacggcgggatgg
tggtggaatgtggccgccgaccctgccttcccagtgagctacaggaccaaggggaacagc
ctgccggagaggagagaaagcgtggaggaggtggacttactgcaggctatcgcggtgccc
ttcgaagacccctccacccagtacttcgtgacgggcttcgatggattccccgccttcggg
ttcaaagtcggcgccagcatcaaacatcccttcagactcttcctgcccgagcgcctctac
agggagttctcgatccaggccgccgttaagcccgacacagaggagccaatgttcctcttc
gcagtaaccaacccgctggagaacctcgtacagctcggcgtctccctctccccaagtgtt
ccgggcgcctccaacctctcgctcttctacacggacgccgagagacacatgacctcgcaa
accatcgcctcctttctcgttccgcagttcaagggagtgtggaccaggttcgcgttccgg
gtcaccgccgcggaggttcagctttggtttaactgtcagcgctacaacgaggtggtggtg
catcgtgtcccccagcagctcgtgtttgactccgcctccacgctgtacatcggccaggcg
ggggggatcttcaagggatacttcgagggggcgctgcaggaactccggatctacagctcc
cccgacatggcacaagtccaatgtaacaaccatttcgcgtaccacacctcggggtcaggt
gacgggcgtgctgacctgcccgtgctggaggaggacagtttcacgttcgacatggaagag
gaagaggaggaagatttgccactcccgaggttggagggttcggggctggacttcgacggc
gcccctccccccctaccgcccccgcccccccctcgaggctgcgacgacaagcactgtagg
gcggtgggcatgacgtgggcatgtaagggcatggagtgggagaaagccgtgtacccgaac
ctcctgggacacgggccgagggaggcggaggcgatggcggcgctgttctggcaccctctc
aactccctgggctgcaataaggagttccgcttcgtcgtgtgctccctgctggccccaccc
tgccgccctggcctgcacaaacccctgccgccctgccgagaggtctgcgaggtggggctg
cgtcagtgcctccctgtcatgtaccggaaccttctcccctggcctcagaacacctttacc
tgcaccatgctcccctacagccaccaggactcttgtttgaggtaccaccaggggcaggtt
gtgtttccgaaagggttggaatcccactgcgccacccagggcctctccgagtactatgat
gatgaatttaatgactcggtgacctcagataaccaccaccgcattctggacttcgaggat
gacgagtacgatgagtctagtcacttgggataccacgaagaccctcaagacttcgatggg
gatgacttcggcggcccaacaagctccagggaccatcttcgggtgttcggtgacggtgct
gatgatggtgatggtgccctggcccactccggagaccacgctcttcaggacttcgatgtt
cgctgtgatggggacttctgcgatgactccgacggggatgatggtggtagtggtggttat
cgtagtagtgatgacgatatggaggggtcaggaaggacgctcaccactactcccaccacc
accactaccaccactaccactgcacccactaccaccactaccactactactaccactact
ccaatgcctaagatatcattcgttaccaccactcctactaccaccatcctcccttccccc
tcctcctcctcctcctcctcctcttctcgcgggcaccaagaagcgggttacctcgtgtcc
agcggtgcggtcaacgattttctcgctcttcccggaccaaagggagagaaagggagcaga
ggtccgaggggtcccccaggggagtccatagcgggtccccccgggcgaccaggccccccc
ggtcccccaggcccctcgacgagaaagattcccttcccgccggacgaggagaacggggtg
gacgcggaggtgtgggcgcggcgcggggagtgtgcctgcaacactacacacctggtggcc
gctgtgttggcgcagatccctcgtgggccgcggggacccaagggagtgccaggcagggac
ggcgtggcgggcaccccgggcacgtcgggacggtcggggcccccgggggagcgcggcccc
cagggggagaagggagacaagggggacagaggcggcacggggaggcgaggagcggacggg
ccccagggagccaaaggggagtctgggctggatggacccccggggcagcgtggggagcct
ggcgcacagggacccccggggcaaccaggctgggccaaccacgacccacaatggaagccg
cgcaatatgttcaagctcgagaacggaatgacggtggccccagctcgccccgggacccca
ggcgccccgggggtgaagggggagcagggggcgctgggggaaaggggcccaagaggtcac
cccgggagtaaaggggagaaaggggagaatggaagccctggggagaagggtgacgagcaa
aaaatgctgattcttacattttatcctttctctcttcctttcttttttctttcttttatt
ctttctttccacctttccggcctggcaggtgagaagggcagcgccgggcgtgggctacca
ggacccccgggcatccctggcaagatgacggaggaggaccgagccgaaatcttcaagcag
ctggtggagcggctggagagcaagaacctgggcagcgggtctcacctgggggaaggcatc
ggcgtttgggaccccagtggaggacttacctgggtggaagaaacagacgacgaggagctg
gggcgtggcagtgaaggctccggcggtgtgctgtatgtgccctaccaccccaaggaaggt
cgagggctgcgtggtccccccggttccccaggcccccgcgggccccaggggatggagggc
atccaggggctgatgggacccccgggggatcgaggcccccccggccagcccggcatggat
gggttaccaggtccgaagggcgacaagggcgaggggggcaccccaggtcgggacgggaca
ccaggtcctgtgggtcccctcggggcgaagggtgagcggggcctgccgggtgtgtcgggg
caggtggccacgctggtgctgcccgacgggagcaacgtgacggtggtcaagggcgacaag
ggtgacagaggacgccgcgggaagagggggcggaggggaccacagggacccccaggaccc
acgggggagctgggcttacctggatggccgggtgcccccggtcggcccggcccccaaggc
ccccccgggaagggcctgaaaggtgagccaggccccccaggaccgccgggccccccagga
cccaccccgccccctggcatcctgaacggcatactgggcagcagcagttctgacgtggcg
gaggctcgtgagggtcccccaggccccgtcggccccagtggccccagtggccccccagga
cccccgggccccccaggagctgagggccccccaggcaagcccgctccccccagtgagaat
gtccacggctacatccccgtgcccggcccaccaggccccccaggacccccaggacctccc
ggtccacgcggcagccctggccccagcacgccggagcagggaggtccgagccaggggaca
ccaagcagcccgtcctcccagccaccgaacatagggcaaagaggaggcggcggttttggt
ggcatagacgagctgagacgcatcacaggacacagagggaacagaggtccctcggggcag
gacggcggccccctggtggtgcccagtgtggtcacctacacggaccgggcctccatgctt
aagatgagcgacgcgacccccgtgggcagcctcgccttcctgctggacgaggagaaaatg
ctcgtgcgcatcaacaggggatggcagcacgtcagcttggggtcagtggtcaccccgcca
accaccacccccgccccgcccaccaccaaccccccgaccaccgacaccaccaccaccccg
ccctccgctgtcggcaccccttccctgcaggtacactcgctccataacaacaaggacggg
ccaaaggaagaattgacgaagctccgcctcgccgccctgaaccagccctacaccggggat
atgcgcggggtgaggggcgtggactatacatgctacagagaggcgcgcagggcgggtctc
agtggtaccttccgggccttcctcacctccagaatacagaacctggactccatcgtgagg
aaggtggatgctgacctacctgtcgtgaatatcaagggcgaggttctcttcaacacctgg
cgcggcatcttctccggggacggcggacggttcatgcagaggcccaggatcttcagtttc
gacgggaaggaagtgttgagcagcccggagtggtga
DBGET
integrated database retrieval system
