Eriocheir sinensis (Chinese mitten crab): 126986877
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Entry
126986877 CDS
T08870
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126986877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esn03041
]
126986877
03009 Ribosome biogenesis [BR:
esn03009
]
126986877
Enzymes [BR:
esn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126986877
Spliceosome [BR:
esn03041
]
Complex A
U2 snRNP components
U2 related factors
126986877
Complex B
126986877
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
126986877
Ribosome biogenesis [BR:
esn03009
]
Eukaryotic type
90S particles
Helicases
126986877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
SRP54
AAA_19
Flavi_DEAD
ResIII
nSTAND3
AAA_25
AAA_30
ABC_tran
ATPase
NACHT
AAA_7
T2SSE
Motif
Other DBs
NCBI-GeneID:
126986877
NCBI-ProteinID:
XP_050699305
LinkDB
All DBs
Position
63:complement(4188669..4219272)
Genome browser
AA seq
833 aa
AA seq
DB search
MSKRKIDINPSALRKRYMPDNDRDMDRESSYLSGSSNYSYNSGRMNYSDYQRSDTYQGSI
GSGGGGMGGGNMGGGNMGGGNMSGGNMGGGNMGGGNMSGGNMGGGNMGGGNMGGGGMGGG
GMGGGGMGGGGMGGGLGMMGNSLHQQRGAVAMSLNPFTNLPYTPRYYELYRKRIGLPVWE
YRTKFFDLLDRHQTIVLVGETGSGKTTQMPQWCVEFARSKGKKAVACTQPRRVAAMSVAQ
RVAEELDVALGQEVGYSIRFEDCSSSKTVLKYMTDGMLLREAMSDPMLENYQVILLDEAH
ERTLATDILMGVLKEVLKQRNDLKLVVMSATLDAGKFQHYFDKAPLLNVPGRTHPVEIYY
TPEPERDYLEAAIRTVIQIHICEEIQGDVLLFLTGQEEIEEACKRIKREVDALGPDVGDL
KCIPLYSTLPPNLQQRIFEAPPPNKLNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAK
QKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEIL
RSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTELGAIMA
EFPLDPQLAKMVIASCDFNCSNEILSITAMLSVPQCFVRPNEAKKAADEAKMRFAHIDGD
HLTLLNVYHAFKQNMEDVQWCYDNFVNYRSLKSADNVRQQLSRIMDRFSLKRTSTDFNSR
DYYMNIRKALVSGFFMQVAHLERTGHYMTIKDNQVVQLHPSTCLDHKPEWVLYNEFVLTT
KNYIRTVTDIKPDWLIKVAPNYYDMQNFPQCEARRQLENIITRFESRQYREGF
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggaaaatagatatcaacccatcggcgctgaggaaaagatatatgcctgac
aatgaccgtgacatggaccgagagagcagctacctcagcggctccagcaattacagctac
aattcaggccgcatgaattacagtgactaccagcgatcagacacataccaaggcagcatt
ggtagtggtgggggtggcatgggtgggggtaacatgggtgggggtaacatgggtgggggc
aacatgagtgggggtaacatgggtgggggtaacatgggtgggggtaacatgagtgggggt
aacatgggtgggggtaacatgggtgggggcaacatgggcgggggcggcatgggcgggggc
ggcatgggcgggggtggtatgggtgggggcggcatgggtggtggtctgggtatgatgggc
aacagccttcatcagcagcgaggggctgtggccatgtcgctcaaccccttcacaaacctg
ccctacaccccaagatactacgagctgtataggaaaagaattgggcttcctgtatgggag
tacagaacaaagttttttgacttgctggatcgccaccaaaccatagtgttggtgggcgaa
acaggttcaggcaagactacacagatgccacagtggtgtgtcgagtttgcccgctccaaa
ggcaagaaagctgttgcttgcactcaacccaggcgagtggcagccatgtctgtggcccag
cgtgtggctgaggaattggatgtagcacttggtcaggaggtgggttactccatccgtttt
gaggattgctcctcctccaaaacagtgctcaagtacatgacagatggtatgttgctgcgt
gaagccatgagtgaccctatgctggagaactaccaggtcatcttactggatgaggctcac
gagcggacattagctacagatatcctgatgggggtgctgaaagaggtgttgaaacagaga
aatgacttgaagctggtggtgatgtcagccaccctggatgctggcaagtttcagcactac
tttgacaaggctccactgctcaatgttcctggccgcactcaccctgttgaaatctattac
actccagaaccagagagggattacttagaagctgccatcaggactgtcatacagatacac
atatgtgaggagatacaaggcgatgtactgctcttcctgacgggtcaagaggaaattgag
gaggcatgtaagcgcatcaagagggaggtggatgctttgggtcctgatgttggggacctc
aaatgcattcctttatattccacactaccccccaatctccagcagcgcatctttgaagct
ccaccacccaacaagctaaatggagccattggacggaaagttgtggtgtctacaaacatt
gctgagacctccctcactattgatggagttgtctttgtgattgacccaggctttgctaaa
cagaaggtgtataatcctcgtattcgtgtggagtccttgttggtgtcgcccatcagtaag
gcatcagcccagcagcgagctggtcgtgcagggagaacgaggcctggcaagtgtttccgc
ctctacacagaaaaggctttcaagaatgagatgcaggacaacacctaccctgagatcctc
cgatccaatcttggctctgtagtgctgcagctcaagaagttgggcattgatgacttggtt
cactttgatttcatggaccctcctgctccagagaccctcatgagagccctagagctcctc
aactacctagcagctcttgatgatgatggtaacctaacagagcttggagcaatcatggca
gagtttccacttgaccctcagctggcaaagatggtgattgcctcttgtgacttcaattgc
tccaatgaaatcttgtccatcactgctatgctctcagtaccgcagtgctttgtgcgccct
aatgaggctaagaaggctgcagacgaggccaagatgagatttgcgcacattgatggggac
cacctcacgctgctgaacgtctaccacgccttcaaacagaatatggaggatgtccagtgg
tgctacgacaactttgtcaactatcgctcactcaagtctgcagacaatgtacgacagcag
ctgtcgcgcatcatggacaggtttagccttaagcgtacttccacagatttcaactctcgg
gactactatatgaacatccgcaaagcccttgtttcagggttcttcatgcaggttgctcac
ttggaacgtacaggccattatatgaccatcaaggacaaccaagtggtgcagctccaccct
tccacttgcctagaccacaagccagagtgggtcctgtacaacgagttcgtcctcaccacc
aagaactacatcaggactgtcacagacatcaaacctgactggctaattaaagtggctccc
aactattatgacatgcagaactttcctcagtgtgaagcccgaagacagctggagaacatc
atcacaagatttgagtctaggcagtatagagaaggattctaa
DBGET
integrated database retrieval system
