Eriocheir sinensis (Chinese mitten crab): 126987231
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Entry
126987231 CDS
T08870
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esn03019
]
126987231
Messenger RNA biogenesis [BR:
esn03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
126987231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_4
zf-CCCH
PRORP
zf-CCCH_2
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
126987231
NCBI-ProteinID:
XP_050699996
LinkDB
All DBs
Position
64:complement(2277576..2332976)
Genome browser
AA seq
1175 aa
AA seq
DB search
MAPRLLKHHHHHHHQPHQLIKRKRKRRFLSFQHNEILLFHLKRDAEPLVVVGERGLTTLN
TMSSEPPQPITTTTTTTSPAEDLKPAKEEGGGEGEEGTEEAGGAEGTLRGRRKLENADSS
YDSDFDPKEEDQHGDVCRTVSDTLGAEFAEYVTKYSPHPPPAHSSSSSSTPTASSSSSST
QSAIPLPVSSTLLITQTPHQASLVKSTTTASTTTTTTTTTTPDTTTTTTTTPTATPTTAF
TKTTVPSTPTTITTTTTTTKDATPTITTTTTASTTTTTTPNVTLTQPHLAPKTDTGVEVE
KPTEVTKPITTTSTTTTTATTPTPSPSYASQVEFGIKLGYSETLVQLALIKLGATPHKDD
LLAELIRLGTSSSPRADQGGGGGGGGGGGGGTSGGGGSEEDRDEMVLSSSSSSSSSSLLQ
PPPHLHHLQEQQQQQQQQLRPIIIDGSNVAMSHGNKTTFSCRGLRVCVEWFRQRGHSEIT
VFVPAWRKEAPRWDTPIADQEVLLELERERVLVFTPSRVCGGKRIVSYDDRYILKEALQC
GGVVVSNDNYRDLVSESPGFRRVVEENLLMFSWVNGRFVPPDDPLGRSGPTLDVFLRRAN
LRDKDKQAPCPYGRKCTYGNKCKYKHPERGTAPLKSVTERLQEQAQRHYQNKAKSRDSSP
GEGLRGSLSLPVCSAADSDVSKKPLARTQSIVPTVSLTLPSALTQDTPTHDHSPATTPAA
PTHSHHHLMPPALDPLRSATLYKSDSALYHLYSSPPGYGASAWGWEGGQQGGGAGHYGSH
LPLGKQQSDPDQQDNPHRKLQRQLTLNPSYDSRLYKIHGFREPAPEHFPLGGAPTPGSGQ
GQAQGQGSPSRVGRGSEGGVFPPGQGRASPGYSSGPYTGRDQGPGGLHTPLARHSSQDGA
KHLASLPPHLYPSYSHPHVTRFASAPDPIWGGAPQATTSAPPPLITRLNSTSDTRLNLYT
TDHLYFPPDLYEDPLGRPASYAPMTHPPGPSQGSRPMSPQSSALHHSPSVSPRGHTPPQQ
QQQQQQPQGSSQPQGPPGSGFPPPGHEDTRLRVFYHLSQLFPEAQVRAVMTHHPEETDPQ
KICGYILAAGQGGSRPMSPQHAQPQPPPPASPYLMQGFPPPAPASHEDARLRAFYHLSQL
FPEAEVRAVLARAPDQTDIQQFCAALLQRRPAHQS
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccagactcctcaaacaccaccaccaccaccaccaccagccccatcagctgatc
aagaggaagaggaagaggaggttcctaagcttccaacacaacgaaattctcctcttccac
ttaaagagggatgcggagccgttggtggtggtgggggagagggggctaaccaccctcaac
accatgtcctcggagccaccccaacccatcaccaccaccaccaccacgacatcaccagcg
gaggacctcaagcctgcaaaagaggaaggaggaggagaaggagaggaagggacagaggag
gccggtggcgccgaggggacgttgagaggcagaagaaagctggaaaatgcggacagcagc
tacgatagtgattttgaccctaaggaggaggaccagcacggggatgtttgcaggacagtc
tcggatacccttggggcggagtttgcggagtatgtcacgaagtactcaccgcatccaccc
cccgctcactcctcctcctcctcctcgacccctacggcctcctcctcctcctcctccacg
cagtccgctattccacttcccgtctcatccactctgctcataacgcaaactccacatcag
gcttcattggtgaaatctacgactacggcctccactactaccactactactactactact
accccagatacaactactacaactactacaactcctacggcaacccccactactgctttt
actaagactacagtaccttcgacccctactactattactaccacaactaccactaccaaa
gacgcgacccctacgataactaccactactactgcttcgaccactaccacaaccaccccg
aatgtaaccttaacccaaccccatctggcgcccaaaaccgatactggggttgaggtcgag
aagcctactgaagttactaagcctattacgactacttctacgaccactactacagctacg
actcccacgccgagcccaagttatgcatcccaagtggagttcgggatcaagttggggtac
tccgagactttggttcaacttgccctcatcaaacttggggcaacaccgcataaggatgac
ctgttggcagagctcattcgactaggcaccagttcgagcccccgcgctgaccaaggtgga
ggaggtggaggaggtggaggaggaggaggtggtacaagcggaggaggaggtagtgaggaa
gatcgagatgagatggtcttatcctcctcctcctcctcctcctcttcctccctccttcag
cctcctcctcatcttcatcatctacaagaacaacaacaacaacaacagcagcagcttcga
ccgattattatagacggcagcaatgtggctatgagccacgggaacaagaccaccttctcc
tgccggggtctacgtgtgtgcgtggagtggtttagacagcgcggtcacagcgaaatcaca
gtctttgttcctgcgtggcgtaaggaggcgccgcgctgggacacccccatcgccgaccag
gaggtgctgctggaactcgagagggagagagtgctggtcttcacgccgtcacgggtatgt
ggcggcaagcggatagtctcgtatgatgaccggtacatcctgaaggaggccctgcagtgt
ggtggcgtggtggtcagcaacgacaactaccgcgacctggtttccgagtcacccggattc
cgccgtgtcgtcgaggaaaatctcctcatgttctcgtgggtcaatggcagatttgtacca
ccggacgaccccctaggacgcagcgggccgactctggacgtcttcctgcgtcgggcgaac
ctaagggacaaggacaagcaagccccgtgtccctatggtcggaaatgtacctatggaaat
aagtgcaagtataaacatccggaaaggggaacggcgccgctcaagtcagtcacagagcgc
cttcaggagcaggcccagcgacactaccagaacaaggctaagagcagggattcgtcacca
ggtgaaggcctccgcgggtccctgtccctgccggtttgctcggccgctgactctgacgtg
tccaagaagccgttggcacgcacccagtccatcgtgcccaccgtgtcgctcaccctgccc
tccgccctcacccaggacacccccacccacgaccactcccccgccaccacccccgccgcc
cccacccactcccaccaccacctcatgccccccgcgctggacccgctgcgctccgccacg
ctgtacaagagtgactccgccctctaccacctctactcctccccccccggctacggcgcc
tcagcctggggctgggaaggggggcagcaggggggcggggcggggcactatgggtcacac
ctgcccctgggtaagcagcagagtgacccggaccagcaggacaacccgcaccgcaagctg
cagcgccagctgaccctcaacccttcctacgactcacggctgtacaagatacacggcttc
agggagcctgccccggagcacttccccctggggggcgcccccaccccaggcagcggccag
ggccaggcgcagggccagggctcccccagcagggtggggcggggctccgaggggggcgtc
ttccccccggggcagggccgcgcctcaccggggtactcctcggggccatacacggggcgg
gatcagggccccggggggctgcacacccccctggcgcgccacagctcccaggacggggcc
aagcacctggcgtccctgccgccccacctctacccctcctactcccacccacacgtcacc
cgcttcgcctctgccccggaccccatttggggcggggcgccccaggccaccacctccgcc
ccgccgccgctcatcacgcgcctcaacagcacctcagacacacgcctcaacctgtacacc
accgaccacctctacttccccccggacctgtacgaggaccccctggggcgccccgcctcg
tacgcccccatgacgcaccccccgggcccctcccagggctcccgccccatgtccccacag
agttcagcgctgcaccactcccccagtgtgtccccgcggggccacacgccgccccagcag
cagcagcagcagcagcagccccagggtagcagccagccacagggccccccgggcagcggc
ttccctccgccgggccacgaggacacgcggctgcgggtgttctaccacctgtcgcagctg
ttccccgaggcacaggtgcgggccgtcatgacccaccaccccgaggagaccgacccgcag
aagatatgcggctacatcctggcggcggggcagggcggctcacgccccatgtccccacag
cacgcccagccccagcccccgccgccggcctccccgtacctcatgcagggcttccccccc
ccggcccccgccagccacgaggacgcccgcctgcgcgccttctaccacctctcacagctg
ttccccgaggccgaggtgcgcgccgtgctggcccgcgccccggaccagaccgacatacag
cagttctgcgccgccctgctccagcgccgccccgcccaccagtcatga
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