KEGG   Eriocheir sinensis (Chinese mitten crab): 126994102
Entry
126994102         CDS       T08870                                 
Name
(RefSeq) cleavage stimulation factor subunit 1-like isoform X1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
esn  Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:esn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    126994102
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:esn03019]
    126994102
Messenger RNA biogenesis [BR:esn03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     126994102
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 CSTF1_dimer Beta-prop_WDR36-Utp21_2nd EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_Aladin Beta-prop_TEP1_C WD40_RFWD3 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_DCAF4 Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_WDR75_2nd Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_HPS5
Other DBs
NCBI-GeneID: 126994102
NCBI-ProteinID: XP_050709305
LinkDB
Position
Unknown
AA seq 430 aa
MKEEEKKEERNKVKQRELLYKLMISQLFYDGHQNFAQELAVIVDQEATAVSPSDRLMNIT
TIGLQHEHEVERPLNRLEYTLGPGLDLEYETEPQTSAPEPAMYETAYVTSHKDKCRAAAF
SMDGSLVATGSVDASIKILDVDRMLAKSDPDAVELHPDAVVGHPVIRTLYDHLDEITCLE
FHPREQILISGSRDTNIKMFDFSKTSAKKAFKTLTDAEQVTSMSIHPSGDFLAVTTEGPV
VRFYDINTCQCYVCPYPREHHAGPLTSVRYSADARVCASASKDGDIKIWDGVSGRCVQTF
TKCHDGAEVCSVLYSRNGKYILSSGLDSIVKLWELSTGRCLIAYTGAGSVGRQEHSAHAM
FNHTEDFVMFPDEATTSLCAWDARNAQRKNLLSLGHNGPVRHMVHSPCSPAFITCSDDYR
ARFWYRRNVH
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgaaggaggaagagaagaaagaggagagaaataaagtcaagcagagggagctcctttac
aaactgatgatcagccagctgttctacgatggccatcagaacttcgcacaggagttggcc
gtcattgtggaccaagaagccacggccgtctccccttcagaccggctcatgaacataacc
accattggactgcagcacgaacatgaggtggagcggcccctcaaccgcctggagtacacg
ctggggcccggcctcgacttggagtacgaaacggaaccccagaccagcgcccccgagcca
gccatgtatgagaccgcctatgtcacctcccacaaggacaagtgtcgtgccgcagccttc
tccatggatgggagtttagtggccacggggagtgtggacgcctctataaagatcttggac
gtggaccgaatgcttgccaaaagtgaccctgatgcagtggagctccatccagatgctgtg
gttggtcacccagtcatccgcacgctgtatgaccacctggatgagatcacttgcctagag
ttccacccgagggagcaaatcctgatatctggcagccgggacaccaatatcaaaatgttt
gactttagtaagacatccgccaagaaggccttcaagactctaacggacgcagaacaggtg
accagcatgtcaatccaccccagtggagacttcttggccgtcaccaccgaggggccagtg
gtcaggttttacgacatcaacacgtgccagtgctacgtgtgtccctacccccgggagcac
catgctgggcccctcaccagcgtgcgctactctgccgacgcccgtgtgtgtgccagcgcc
tccaaggatggagacatcaaaatctgggatggggtgtcgggccgctgtgtgcaaaccttc
accaagtgccacgacggggctgaggtctgctccgtgctctactctcggaatggcaagtac
atcctgtcgtcgggtctggacagcattgtcaagttgtgggagctgtcaacgggccgttgc
ctcattgcctacactggtgccggctcagtgggccggcaggagcacagcgcacacgccatg
ttcaaccacaccgaagactttgtcatgttcccggacgaggccaccacctccctctgtgcc
tgggacgctcgcaatgcccagaggaagaatctgctgtccctcggtcacaatggccctgtg
cgacacatggtccactcaccctgctcgccggccttcatcacctgctcagatgactaccgg
gcaaggttctggtaccgcaggaatgtccactga

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