Eriocheir sinensis (Chinese mitten crab): 126994503
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Entry
126994503 CDS
T08870
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03040
Spliceosome
esn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126994503
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126994503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esn03041
]
126994503
04121 Ubiquitin system [BR:
esn04121
]
126994503
03400 DNA repair and recombination proteins [BR:
esn03400
]
126994503
Enzymes [BR:
esn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126994503
Spliceosome [BR:
esn03041
]
Complex B
Other components
Prp19 complex
126994503
Complex C
Prp19-CDC5 complex
126994503
Ubiquitin system [BR:
esn04121
]
Ubiquitin ligases (E3)
U-box type E3
126994503
DNA repair and recombination proteins [BR:
esn03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
126994503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_SPT8
PEP5_VPS11_N
U-box
Beta-prop_DCAF4
eIF2A
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
PROPPIN
Cytochrom_D1
WD40_like
ATG16
PUMA_CC
DUF7099
Motif
Other DBs
NCBI-GeneID:
126994503
NCBI-ProteinID:
XP_050709776
LinkDB
All DBs
Position
7:complement(20575789..20590100)
Genome browser
AA seq
505 aa
AA seq
DB search
MALVCAISSEVPDQPVVSPLSGAVFERRLLEKYIAENGTDPITNKELSVDQLIELKVPPV
AKPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAATRVIARL
NKEVTAAREALATLKPQAGIAPAAPAGPTIAATAEAGGAADVPSEGAGLTEEVVARLQDT
ATILTQERKRRGRTVPEGLTPAEQIRGYTTLASHPGLHSASVPGILALDVHQKDTSKIVT
GGSDKNATVFNKDTEQVVAILKGHTKKVSCVVYHPTEDTVITASPDTQIRVWNVGTSQTL
QLIRAHEGPVTGLSLHATGDYLLSASRDHNWAFSDIRTGRVLCKVCDASASSPLTAAQFH
PDGLILGTGTQDATIKIWDLKERSNVANFPGHSGAISSIAFSENGYYLATAAEDSTVRLW
DLRKLKNFRTIQLDEGYEVMDLSFDQSGTYLAVAGTDVRVYLCKQWNDLRIFNDHTAMAT
GVRFGANASYLASTSMDRTLKIYGP
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggctctagtttgcgcaatcagcagcgaggtgccagaccagcccgtggtgtcgccgctc
tcgggtgccgtgtttgagcgccggctactggagaaatacatcgccgagaatggcactgac
cccatcaccaataaggaactctctgttgaccagctcattgaacttaaagtgccgccagtc
gctaagcccaaaccgcccagtgccaccagtatccccgccatcctgaaggctctgcaggac
gagtgggatgccgtcatgctgcactccttcaccctccgccagcagctccagaccgctcgc
caggaactcagtcatgccttataccagcatgacgcagccacccgtgtgatcgcccgtctc
aacaaggaggtgacggctgcgcgagaggccctggccacgctgaaaccccaagctggtatt
gccccggccgctcctgctgggccaaccatcgccgccacagctgaggccggcggtgcagcg
gatgtgcctagcgagggtgcagggctgacggaggaggtggtggcgcggctgcaggacacg
gccaccattctcacccaggagcgcaagagacgtggacgcacggtgccggaggggcttaca
ccggccgagcagatccgaggctacaccaccctggcctcgcatcccggtcttcacagcgcc
tccgtgcccggcatcctggctcttgacgtgcaccagaaggacaccagcaagatcgtgacc
ggcggcagcgacaagaacgcaacggtcttcaacaaggacacggagcaggtcgttgccatc
ctgaagggtcacaccaagaaggtctcgtgtgttgtgtaccaccccaccgaggacaccgtc
atcactgcttccccggacacacagattcgtgtatggaatgtcggcacttcccagactctt
cagctgatccgcgctcacgaggggccggtgacgggcctgtccctgcatgccactggggac
taccttctctcagcttcacgcgaccacaactgggcattctcggacattaggaccggacgt
gttctctgcaaggtctgtgatgcctccgccagctccccgctcaccgctgcacagttccac
cccgacggcctcatcctcggcacaggcacacaggacgctaccatcaaaatctgggacctc
aaggaacgctccaatgtcgctaacttccccggacacagcggcgccatcagctccatcgcc
ttcagtgagaatggttactatctggccacagctgctgaggactcaacagtgaggctttgg
gatttgcgcaaactcaagaacttccgcacaattcagcttgacgagggttacgaagtgatg
gacctcagcttcgaccagtctggcacctatctggcagtggctgggactgacgtgagagtg
tacctgtgcaagcagtggaacgacctgcgaatctttaacgaccacaccgcgatggccaca
ggtgtacgatttggggccaacgcatcctacctggcctcgacctcaatggaccgaaccctc
aagatctatggcccctaa
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