Eriocheir sinensis (Chinese mitten crab): 126996094
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Entry
126996094 CDS
T08870
Name
(RefSeq) DNA mismatch repair protein Msh3-like isoform X1
KO
K08736
DNA mismatch repair protein MSH3
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126996094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esn03400
]
126996094
DNA repair and recombination proteins [BR:
esn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
126996094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Betaherpes_U91
3HCDH_N
DUF7032
Motif
Other DBs
NCBI-GeneID:
126996094
NCBI-ProteinID:
XP_050712170
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All DBs
Position
9:complement(19399575..19650312)
Genome browser
AA seq
1088 aa
AA seq
DB search
MQQVLADTSFFKMSGMNSKKQPTISKFFASMNRGGAKNFTTDEEKKEKNHVQVAEVSVSP
AIKRANSSSKGGRGGKSSAKKAKIENDKNSPPSSSPTQNGSPKKRELGAWTKTRLNAFSC
DPEPEENGVTSMDVDEVESSPETSQKNDKNGVGSRLDSFKNTNNSSTSQSSSVVGPSSFK
AAPLRPLPGMKLTPLEQQVADIKNKQPDVLLFVECGYKYRFFGNDAEIAAKELNIIAHLD
HSFMTASIPTHRLYVHARRLVAKGYKVGVVKQTETAALKAAGGNKTAPFGRKLTALYTRS
TLIGEDVTPGVGGAGLEDGDVSEGTTAMLLVLSEVKGSSGKDGAVVISIVAIQPSTGDII
YDTFEDSKTRTELLNRLDHLQPVEAVVSPSTSELTTTTITTSATKNDDCIRIERLDESKF
DYSNSLKLIVTLFEDEEEKVKHISCLPSSVVGCLGATLQYLAEFKLDGIVKMAGSIEKYS
SSRHHMRLSGATLRNLEVLANASDGGTKGSLFWALDNTQTKFGSRLLRRWVTQPLLEAGE
IKERQDMVEEMMTSDAPVLVKLKSALYKLPDFERAITTIFHKKCSPHEFWLAVQGLSRLH
SELSRVGGNVEDSVTSPGLVELLRDVLDGLANVEAYAANINEASAKEGKKTTLLRDFSEY
PNVIARQQEIADMEQKLNGLIPDIARTLGVPAFKYTTVSGLEYLIEVTNSRLKAVPKNWS
KISSTKAVSRFRSPEIEKHFQRLQQLREQLQMDCHEAWIKVLESFSSHYHRHRQAVRSLA
TLDALVSLAAVAKAQGYCRPTLSEKGSGGAMLKIVQGRHPVVCQIQTGDEQYVANDTNME
VDGERVMLVTGPNMGGKSCYMRQVALIALMAQMGSFVPAESVDMTILDGIYTRMGAADEI
FSGRSTFMVEVGETADIMREATKDSLVILDELGRGTSTHDGVAVAMAVLDHFLNRVGCLT
IFVTHYLPLTDFGRIYPSQVGNYHMAFIVNDEEENNGVEAVTFLYQLTSGSAGQSYGLNV
ARLAEVPQPILVRASEKSSELEKTCISKRKRIELFQELMTTKDTEELRQQLTVLKNMNEG
IDSGVESG
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagtcctggcagatacaagttttttcaagatgtctggcatgaattccaagaaa
cagcccacaatctcgaagttttttgcctccatgaacagaggaggagcaaaaaacttcacc
acagatgaggagaagaaagagaaaaatcatgtccaggtggcagaggtcagtgtatctccg
gccatcaagcgagccaacagcagcagcaagggaggcagaggaggcaaaagctcagcaaag
aaagcaaagatcgagaatgacaagaacagtcccccttcctcctccccaacccagaacggc
agccccaagaagagggagcttggagcgtggacaaaaacaagactcaatgctttttcttgt
gatccagagcctgaggagaatggggtaacctctatggatgtggatgaagtggagtcgtca
ccagaaacttcccaaaagaatgacaagaatggtgttgggagcagactggattctttcaag
aacacaaacaacagcagcaccagtcagtcttcgtccgttgtgggcccgtcctccttcaag
gctgctcccctcagaccgttgcccgggatgaaactgacccccctggagcagcaggtggcg
gacatcaagaacaagcagcctgacgtcctgctgtttgtcgagtgtggctacaagtacagg
ttttttggcaatgatgcagaaattgctgccaaggaactgaacatcattgctcacctggac
cacagcttcatgacggccagcatccccacacaccgcttgtatgtgcacgcccggcggctg
gtggccaaagggtacaaagtcggggtggtgaaacagaccgaaacagccgccctcaaagct
gcaggagggaacaagacggcacccttcggacggaaactgacggcactgtacactcgctcc
accctgatcggggaggacgtgacccctggtgtgggcggggcaggcctggaggatggggac
gtgtcggaggggaccacggccatgctcctggtgctgagtgaagtgaagggctcctcgggg
aaagacggcgctgttgtcatctccatagtggccatccagcccagcacgggggacatcatt
tatgacacgttcgaggactccaagacaaggacagagctgttgaaccgtctggaccacctg
cagcccgtggaagccgttgtgtcacccagcacctcggagctcaccactaccaccatcacc
acatcagccaccaagaatgacgactgcatccgaatcgagcgcctggacgagagcaagttt
gactacagcaactcactcaagctcatcgtgaccctgtttgaagacgaggaggagaaggtg
aagcacatctcctgtctgccgtccagtgtggttggctgtctcggtgccacgctgcagtac
ctcgccgagttcaagcttgatggcattgtgaagatggccgggtccatcgagaaatacagc
tccagccgtcaccacatgcgcctctcgggggccacactgcgtaacctggaggtgctggcc
aacgcatcagacgggggcaccaagggcagcctcttctgggccctggacaacacacagaca
aagtttgggtccaggttgttgaggcggtgggtcacacagcctctgctggaagcgggagag
atcaaggagcggcaagacatggtggaggagatgatgacctcagacgccccagtgctggta
aagctgaagtctgccctctacaagctgccagactttgaaagggccatcaccaccattttc
cataagaagtgcagcccccatgagttctggctggcagtgcagggcctcagccgcctccac
tccgagctgtcaagagttggagggaacgtagaggacagtgtcacctcccccggcctcgtg
gagctcctccgggacgtgctggatgggctggctaacgtcgaggcctacgcagctaatatt
aacgaggccagtgcaaaagaaggcaagaaaactacacttctgagggatttctcagagtac
ccaaatgttatagcgaggcagcaggaaatagcagatatggagcagaagctgaatggtctt
attccggatattgcaaggacccttggagttcctgccttcaaatacacaacagtgtctggc
ctcgagtacctcattgaagtcaccaactcacgcctcaaagctgtccccaaaaactggtct
aagataagctcgacaaaagcagtcagcaggtttcggtctcctgagatagagaaacacttc
cagaggctacagcagctgagggaacaactgcagatggactgtcatgaggcatggataaag
gtgctggaatcattctccagccactaccatcgccaccgccaggctgtgaggtcccttgct
accctggatgccctggtgtccctcgctgctgtggccaaagctcagggctactgccgaccc
actctgtcagaaaaggggagtggcggggcgatgctgaagattgtgcagggccgtcacccg
gtggtttgtcagattcagacaggggacgagcagtatgtagccaacgacaccaacatggag
gttgatggggagcgtgtgatgcttgtaacagggccaaacatgggcggcaagtcttgctac
atgcggcaggtggccctcatcgccctaatggcccagatgggaagctttgtgccagccgag
tcagttgacatgactattctggacggcatctacacaaggatgggcgctgcggacgagatc
ttctctggacgcagtacattcatggtggaggttggggagacagctgacataatgcgagag
gccaccaaggactctctggtgatcctggatgagcttggccgcggcacctcaacacatgac
ggtgtagcagtggccatggcagtcctggaccacttccttaaccgtgttggctgcctcacc
atctttgtcacccactacctccccctcaccgactttggccgcatctacccatcacaagtg
ggcaactaccacatggcatttattgtgaatgatgaagaagagaacaatggagtagaggct
gtgaccttcctgtatcagctgacctcagggagtgccggccagagctatggcctcaatgtg
gcccgcctggccgaggtgccccagcccatcctcgtccgggcctccgagaagtcaagtgaa
ctggagaaaacttgcatttctaagaggaaaagaatagagctcttccaggagttaatgacg
accaaagacactgaggaactacggcagcagctgacagtgctgaaaaatatgaatgaggga
atagatagtggagtggagagtggatag
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