Eriocheir sinensis (Chinese mitten crab): 126996800
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Entry
126996800 CDS
T08870
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esn04121
]
126996800
Enzymes [BR:
esn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126996800
Ubiquitin system [BR:
esn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
126996800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
126996800
NCBI-ProteinID:
XP_050713620
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All DBs
Position
11:5970575..6006175
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AA seq
963 aa
AA seq
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MSVMIRVSSPGINFPLCHIPPVLTNLLLQVNGHDVSGLSHTEAVQVFQEAEEPILVQVLR
RPHNNNTQQHPPSPPAHAHAPGKQGRKGEEEEEEEAREEEGSVRDGDSSTTGTQTEISLM
GVSEWEVAASAWAAAAAGVGVGVGDGSDSDSPDGDYIFPGDLPQSISQYLEQEIDLEEII
LERTTENEKLGLTLYYSNAPAPPPTHVAEQDPGAAEDEGGGDGGAGQQAYKGVVTEVLVS
QIEQGTVASRDGRLRIGDQILQINGVELTTKAQTEELFAGCGTRVSLLVSRTQYYDEDDL
VEGEVLEDVVEEEEEVELLEANSEFLTSRSPVLSMRSSNSGDSKKVSQEDSAHASTTRSS
SSSTSSSCERKPTKRDSSTSSTSSRGSQVQVAGAGTMEREMAVLGEKMAELAQECEELEA
ERRGGPKEVEAPYKVPLEVQQKQQQQALQQQKRSPAKGSVSGRPPARPPPPPGSESEHIY
ESIPDVSESDEPIYCVPYEPGGGGSGRRRTPGRASTQPRPQGHQKALQPQPAQSGRAGRG
SGTSSSSGGSVRERRAAERKQSVEKWMRENPHPRSPPSTKPSPTPPKPQEERDSSSAYNT
GDSTGSTHQPPTLELSLGQDPALRQSTLTLCPPTHDQSLQVSLESDTYSAISCDSCRRCM
RLPPLHASLPQKSSGAGRSQDSDHASTAPPPHPPTHKPPGAPPDTESNRNYVTFLPAQTM
YTNAANLQQTIWLQQQLFRQALTRDTSAPSTPTSTPRGLPPRAPPRAHHDQPVKMEWKVK
RRPDGTRYITQRPVRSKILKERAIKINEERAGLTTDDDAMSEMKLGRYWSREERKRHLEK
ERERRRRHELLRRQHQQQQPQPQAAQSQAPTAHLPPEEPVQPPPRPSTLENGLHQALWRD
HSSRRKTSATLDASHRKVSSSRKREPEEPPYGVRTPVVPLNPPPPPHQAGQQLVKGLLSV
TTV
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttatgattagagtaagttctccaggtattaattttcccctgtgccacatcccc
ccggtgctaacgaacctccttctccaggtgaacgggcacgacgtgagcgggctgagccac
actgaggcggtgcaggtgttccaggaggcggaggagcccatcctggtgcaggtgttgcgg
cgcccccacaacaacaacacccagcagcacccgccctcgccccccgcccacgcccacgcc
ccgggaaagcaggggaggaagggcgaggaggaggaggaggaggaggcgcgggaggaggag
gggagtgtgagggatggagatagcagcacaacggggacgcagacggagatttccctgatg
ggcgtgagcgagtgggaggtggcggcgtcagcgtgggcggcggcagcggcgggcgtgggc
gttggtgtgggtgacgggagcgattctgactccccggacggcgactacatcttccccggc
gatctcccgcagtcgatctcgcagtacttggagcaggagattgaccttgaagagatcatc
ttggaacgcaccacggagaatgagaaactcggcctcaccctctactacagcaacgccccc
gcccccccgcccacgcacgtagcggagcaggacccgggggcagcagaggacgagggcggg
ggcgatgggggggcggggcagcaggcgtacaagggcgtggtgacggaggtcctcgtgtcc
cagattgagcaggggacggtggcgagcagggacggcaggctgaggataggcgaccagatc
ttgcagatcaatggtgtggagctcactaccaaggctcagaccgaggagctgtttgctggc
tgtggcacgagggtcagcctgctagtctcccgcacccagtattacgacgaggatgacctg
gtggagggcgaggtgctggaggacgtggtggaggaggaggaggaggtggagctgctggag
gccaactcggagttcctcacaagcaggtccccggtgctgtccatgcgcagcagcaacagc
ggcgacagcaaaaaggtctcccaggaggactcggcccacgccagcaccacccgctcttcc
tcctcctccacttcctcctcctgtgaacggaaacccaccaagagagactcctccacatcc
tccacctcctctagaggctcacaggtgcaggtcgctggcgccggcacgatggagcgggag
atggccgtattgggggagaagatggcagagctggcccaggagtgcgaggagctggaagca
gagcggcggggcggccccaaggaggtggaggccccgtacaaggttcctcttgaagtgcag
cagaagcagcagcagcaggcactacagcaacaaaaacggtctccagccaaagggtcagtc
tctgggcggccgccagccaggccgccgccgccccctggctcagagtcggagcacatctac
gagtccatcccagacgtgagcgagtctgacgagcccatctactgtgtcccgtatgaaccc
ggcggtggcggcagcggccgccgccgcacgccaggccgcgccagcacccagccccggccc
cagggccaccagaaggccctgcagccccagccggcccagtctggccgggcaggccggggc
agcggcaccagcagcagcagcggcggcagtgtgcgtgagcggcgggcggcagagcggaaa
cagtccgtggagaagtggatgagggagaaccctcaccctcgctcccccccttccaccaag
ccatcaccaacccccccgaagccccaggaggagcgggactcctcctccgcctacaacacc
ggggactccaccgggagcacccaccagccccccacactggaactgagcctcggccaggac
cccgccctcaggcagtccaccctcaccctctgcccgcccacacacgaccagtcactccag
gtgagccttgagtcggacacatactccgccatctcctgcgacagctgccgccgctgcatg
aggcttccgcccctccatgcgtccctcccacagaagagcagcggtgcggggcggagtcag
gactcagaccacgcctccaccgccccacccccccatccccccacacacaagccccccggt
gctcccccagacacggagagcaacaggaattacgtgaccttcctgccggcccagaccatg
tacaccaacgccgctaatctgcagcagaccatctggctccagcagcagctcttccggcag
gccctcaccagggacaccagcgccccctccacccccacctccaccccacgcggcctgccc
ccccgcgccccgccaagagcccaccatgaccagcccgtcaagatggagtggaaggtgaag
cgtcggcctgatggcactcggtacatcacgcagcgtcccgtcaggagcaagattctgaag
gagcgtgccatcaagatcaacgaggagcgcgccggactgaccacagacgatgatgccatg
tccgagatgaagcttggccgctactggagtcgggaggagcgcaagcgtcacctggagaaa
gagcgagagcgacggcggcgacatgagctgctgcgtcgccagcaccaacagcagcagccc
cagccccaggcagcacagtcccaggcccctacagcacaccttccccctgaggagcccgtg
cagccgcccccacgtcccagcaccctcgagaacggccttcaccaggcgctctggcgggac
cactccagcagaaggaagacctcggccaccctggacgcctcccacaggaaagtgtcgtcc
tccaggaagcgtgagccggaggagccgccctatggagtgaggacgcccgtggtgccgctc
aacccgcccccgccgccacaccaggccggccagcagctggtgaaaggcctcctctccgtc
accaccgtctga
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