KEGG   Eriocheir sinensis (Chinese mitten crab): 126997391
Entry
126997391         CDS       T08870                                 
Name
(RefSeq) replication factor C subunit 2-like
  KO
K10755  replication factor C subunit 2/4
Organism
esn  Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03030  DNA replication
esn03410  Base excision repair
esn03420  Nucleotide excision repair
esn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:esn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126997391
   03410 Base excision repair
    126997391
   03420 Nucleotide excision repair
    126997391
   03430 Mismatch repair
    126997391
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:esn03032]
    126997391
   03036 Chromosome and associated proteins [BR:esn03036]
    126997391
   03400 DNA repair and recombination proteins [BR:esn03400]
    126997391
DNA replication proteins [BR:esn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    126997391
  DNA Replication Termination Factors
   ELG1-RFC complex
    126997391
Chromosome and associated proteins [BR:esn03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    126997391
DNA repair and recombination proteins [BR:esn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     126997391
  Check point factors
   HRAD17(Rad24)-RFC complex
    126997391
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 AAA_16 AAA_24 Viral_helicase1 RCF1-5-like_lid Rad17 nSTAND3 Mg_chelatase RuvB_N AAA_11 AAA_assoc_2 AAA_18 AAA_5 ABC_tran NTPase_1 MipZ AAA_19 AAA_23 RNA_helicase AAA_28 DNAX_ATPase_lid AAA_25 IstB_IS21 MeaB ATPase_2 AAA_3 AAA_30
Other DBs
NCBI-GeneID: 126997391
NCBI-ProteinID: XP_050714415
LinkDB
Position
12:complement(10502251..10512820)
AA seq 347 aa
MASEEAAMEVAEAAPKSSAPSTTAKTTHVPWIEKYRPTTFPEIVGNEETVARLEVFAKKG
NVPNIIIAGPPGVGKTTTILCLARALLGPSFREGVMELNASNDRGIDVVRNKIKMFAQQK
VTLPKGKHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNSSEKIIEPIQSRCAM
LRYSKLSDTQVLSKLLHVCSKEDLSYTDDGIEAILFTAQGDMRQALNNLQSTAQGFGHVN
SDNVFKVCDEPHPVLIKEMIMHCVGTCYDDAYKILAHLWKLGYASEDIITIMFRVCKNTD
MGEFIKLEFIKEIGYTHMRIVQGTSSLLQLSGLLAKLCSKAMETKNE
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggccagcgaggaggcggcgatggaggtggcggaggctgcccctaaaagctctgcaccc
tccaccactgccaagacaacacacgtgccatggattgaaaaatatcggcctacaactttt
ccagaaattgttggaaatgaagaaactgtggcaagactggaagtgtttgcaaagaaagga
aatgttccaaacatcatcattgctgggccacctggtgtaggcaaaacaactacaatattg
tgtttagcacgagcccttcttggtccaagctttcgagaaggagtgatggaactcaatgct
tctaatgaccgtgggatagatgttgtccgcaacaaaattaaaatgtttgctcaacagaaa
gttacactccccaaaggaaaacataaaattatcatcttggatgaagcagatagcatgact
gatggtgcccaacaggccttgagaaggaccatggagatatattctaacacaacccggttc
gccttggcctgcaactcttctgaaaagatcattgagccaatccagtcacgctgtgcaatg
ctgcgatattcaaaactatctgatactcaggtccttagcaagctgctgcatgtgtgttct
aaagaggatttaagttatacagatgatggcattgaagccatactctttactgcccaagga
gatatgagacaagctcttaacaaccttcagtctactgcacaaggctttggccatgtaaac
tctgacaatgtgttcaaggtttgtgatgagccacacccagtgctcattaaggaaatgatc
atgcattgtgttggaacctgctatgatgatgcttataagattctggctcatctatggaag
ctgggttatgcctctgaagacatcatcacaattatgttcagagtatgcaagaacacagat
atgggagaattcatcaaattagaattcattaaggaaattggctacacccatatgcgcatt
gttcagggaacttcttcactactccagctttcagggctgcttgccaagttatgttctaag
gctatggaaactaagaatgagtag

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